Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2016 |
Symbol | |
ID | 4668943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2192541 |
End bp | 2193620 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639823227 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_970374 |
Protein GI | 120610696 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0633546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0167782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTC GTTCCATCCT CAAGCACGCT GGCATCGCCG GCGTGCTGGC GGCCGGCGCA GCCCCCGCTG TGCACGCCCA GGCCAGCATC CGCTGGCGCC TCGCGTCCAG CTTCCCCAAG TCGCTCGACA CCATCTATGG CACGGCGGAA GTGTTCTCCA AGAAGGTCAG CGAAGCCACC GGCGGCAAGT TCCAGATCTC CGTGCATGCC GGCGGCGAAC TGATGCCCGC CTTCGGCGTG GTGGACGGCG TGCAGAACGC CTCCGTCGAG ATGGCGCACA CGGCGCCTTA CTACTACTAC GGCAAGGACC CGACGTTCTG CCTGGGCTGC GCCGTGCCCT TCGGCCTGAA CGCGCGGCAG ATGAACGCCT GGATGTACGA GGGCAACGGC CTGAAGCTGA TGCGCGAGTT CTACGCCAAG TACAACATCA TCAGCTTCCC CGGCGGCAAC ACGGGCGCGC AGATGGGTGG CTGGTTCCGC AAGGAGATCA AGTCCGTCGC CGACCTCAAG GGCCTGAAGT TCCGCACCAA CCCCTTCGCG GGCAAGGTGC TCGAGCCCTT CGGCGTGATC CCGCAGTCCA TTCCCGCCGC CGACCTGTAT CCGGCGCTGG AAAAGGGCAC GATCGATGCG CTGGAATGGG TGGGACCGTA CGACGACCAG AAGCTGGGCT TCAACAAGGT CGCGCCGTTC TACTACTACC CCGGCTGGTG GGAGGGTGGC CCGCAACTGG ACTTCTACAT CAACACCAAG GCCTGGGAAG GCCTGCCGGC CGAGTACAAG GCCGTGGTGG AAGCCGCCGC CTCGCACGCG CACGTCACTA TGCTGTCGAA GTACGACGCG CGCAACCCCG TGGCGATCAA GCAGCTCGTG GGCTCGGGCA CCAAGCTGCG GCCGTTCACG CAGGACGTGA TGAACGCGGC GTTCAAGTCG GCGCAGCAGA TCTACGCGGA CCTGAACAAC ACCAATCCGG AGTGGAAGAA GGTCTATACG GATTACGCCA AGTTCCTGGC GGACGAGAAC GCGTGGTTCC GGTTCACGGA AGGCACGTTC GATCGATTCA TGCAGGCGCA GAAGCTCTGA
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Protein sequence | MDRRSILKHA GIAGVLAAGA APAVHAQASI RWRLASSFPK SLDTIYGTAE VFSKKVSEAT GGKFQISVHA GGELMPAFGV VDGVQNASVE MAHTAPYYYY GKDPTFCLGC AVPFGLNARQ MNAWMYEGNG LKLMREFYAK YNIISFPGGN TGAQMGGWFR KEIKSVADLK GLKFRTNPFA GKVLEPFGVI PQSIPAADLY PALEKGTIDA LEWVGPYDDQ KLGFNKVAPF YYYPGWWEGG PQLDFYINTK AWEGLPAEYK AVVEAAASHA HVTMLSKYDA RNPVAIKQLV GSGTKLRPFT QDVMNAAFKS AQQIYADLNN TNPEWKKVYT DYAKFLADEN AWFRFTEGTF DRFMQAQKL
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