Gene Aave_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2013 
Symbol 
ID4669537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2189089 
End bp2189442 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content69% 
IMG OID639823224 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_970371 
Protein GI120610693 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.322776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00272964 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTTTCGT GGCCGGCGTG TGACGCATGC CTGCGCGACG CTGCCGCCGC AGCCATGCGC 
CTAAAATGGC CCGTTTTACC CGTGCCCGCC GGCGCGGCTG CTTCCATGCC CAAGGCCTCT
TCCCCCGCTT CCACCCCCCC GTCCCCCGAG CCCGCGAGTT ACGAAGCCGC GCTGGAGGAA
CTGGAACAGC TGGTGGGCCG CATCGAGTCG GGCCAGTTGC CGCTCGAACA GATGCTGGCC
GGCTACCAGC GCGGCGCGCA GCTGCTGGCG TTCTGCCGCG GCCGCCTGGA GGCCGTGCAG
GACCAGATCA AGGTGCTGGA GAACGGCACG CTGCAACCGT GGACGCAAGA CTGA
 
Protein sequence
MFSWPACDAC LRDAAAAAMR LKWPVLPVPA GAAASMPKAS SPASTPPSPE PASYEAALEE 
LEQLVGRIES GQLPLEQMLA GYQRGAQLLA FCRGRLEAVQ DQIKVLENGT LQPWTQD