| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2011 |
|---|
| Symbol | |
|---|
| ID | 4668532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2186725 |
|---|
| End bp | 2187642 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823222 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_970369 |
|---|
| Protein GI | 120610691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0258502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00330682 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC TCTGGATGGT CCTCGCCGCA TTCCTCTTCG CGAGCATGGG GGTCTGCGTG
AAGATGGCAT CGGAACACTT CAACGCGGCC GAACTGGTGT GCTACCGGGG CATCATCGGC
ATGGCCATCC TCTGGGCGCT GGCGCGGCGC CAGGGCGTGG GACTGGGCAC CCGCTACCCG
GGCATGCACG CCTGGCGCAG CCTGATCGGC GTCGTCTCGC TCGGCGCATG GTTCTACGCC
ATCGCGCACC TGCCGCTCGC CACGGCCATG ACACTCAACT ACATGAGCAG CGTGTGGATC
GCGGCCTTCA TCGTGGGCGG TGCCCTGCTG GCCTGGCGGC CGTCGGGCGG CACCGGCGGC
ACGCGCCCGC CCCTGCAGGC CCCGCTGGTG ATGACCGTGA TGGCCGGGTT CGCGGGCGTG
GTCATGATGC TGCGCCCCAG CCTGGACGCG CACCAGATGT TCGCGGGCCT CATCGGCCTG
CTGTCGGGCC TGTCCGCCGC CTTCGCCTAC ATGCAGGTGA TGGCGCTGTC GCGCATCGGC
GAGCCGGAAA CGCGCACGGT GTTCTATTTC GCGGTCGGCT CGGCCGTGGC GGGCGGCGCG
GCCATGCTGC TCACGGGCGC CTCGGCCTGG CCGGGCTGGC CGGGCCTGTG GCTTCTGCCC
ATCGGCTTCC TGGCCGCCGC CGGCCAGCTC TGCATGACGC GCGCCTACGC GCGGGCGGGC
TCGCAGCGCG GCACCCTGGT GGTCGCCAAC CTGCAGTATT CCGGCATCGT GTTCGCGGGG
GTGTACAGCG TGGTGCTGTT CGGCGACGAC ATTCCGCCCA TCGGCTGGGC CGGCATGGCA
CTGATCATCG TGAGCGGGAT CGTCGCCACG GTGCTGCGCG CGCGTGCGGC ACCGGGAGCG
CCGGCGGAAG AGCACTGA
|
|---|
| Protein sequence | MQALWMVLAA FLFASMGVCV KMASEHFNAA ELVCYRGIIG MAILWALARR QGVGLGTRYP
GMHAWRSLIG VVSLGAWFYA IAHLPLATAM TLNYMSSVWI AAFIVGGALL AWRPSGGTGG
TRPPLQAPLV MTVMAGFAGV VMMLRPSLDA HQMFAGLIGL LSGLSAAFAY MQVMALSRIG
EPETRTVFYF AVGSAVAGGA AMLLTGASAW PGWPGLWLLP IGFLAAAGQL CMTRAYARAG
SQRGTLVVAN LQYSGIVFAG VYSVVLFGDD IPPIGWAGMA LIIVSGIVAT VLRARAAPGA
PAEEH
|
|---|
| |