Gene Aave_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2005 
Symbol 
ID4666401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2181214 
End bp2181765 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID639823216 
Producttranscriptional activator FlhC 
Protein accessionYP_970363 
Protein GI120610685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0232407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00239216 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAG CTGCCGCCCC CGTGAAGAGC GTCCTGAACG AATCCAAGCA GATCGAGCGC 
GCCGCCATGC TGATCCAGAT GGGCGCCCGC ATGCAGGTGC TGGAGTCGGA GACCTCCCTG
TCGTACGAAC GCCTGATCCG GCTCTACAAG GAAATCGCCG GCAAGTCGCC TTCCAAGGGC
CAGCTGCCGT TCTCCACCGA CTGGTTCCTC ACCTGGCAGG AAAACGTCCA CAGCTCCCTG
TTCCTGAACA TCTACGAATA CCTGTCCAAG GGTGTGAGCC TGGATTCCGT GGAACTGCTC
ACCAAGGCCT ACCGGCTCTA CAGCGAGCAG GTCGCCACGG CCGAGATCGA ACCCCTGTTG
TCTTTCACCC GCGCATGGCG CCTGGTGAAG TTCGTGGATG CCGGTATGCT CACGCGCACC
AAGTGTTCCC GGTGCGGCGG CCATTTCGTC ACCGAAATGT ACGAAAATCC ACGTGCCTAC
ACCTGCGGGC TGTGCAATCC TCCGGCCCGC GCCGGCAAGA GCAAGTCGGC CGGCGCGCTG
ATGCTGCACT GA
 
Protein sequence
MTAAAAPVKS VLNESKQIER AAMLIQMGAR MQVLESETSL SYERLIRLYK EIAGKSPSKG 
QLPFSTDWFL TWQENVHSSL FLNIYEYLSK GVSLDSVELL TKAYRLYSEQ VATAEIEPLL
SFTRAWRLVK FVDAGMLTRT KCSRCGGHFV TEMYENPRAY TCGLCNPPAR AGKSKSAGAL
MLH