Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2005 |
Symbol | |
ID | 4666401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2181214 |
End bp | 2181765 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639823216 |
Product | transcriptional activator FlhC |
Protein accession | YP_970363 |
Protein GI | 120610685 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0232407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00239216 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCAG CTGCCGCCCC CGTGAAGAGC GTCCTGAACG AATCCAAGCA GATCGAGCGC GCCGCCATGC TGATCCAGAT GGGCGCCCGC ATGCAGGTGC TGGAGTCGGA GACCTCCCTG TCGTACGAAC GCCTGATCCG GCTCTACAAG GAAATCGCCG GCAAGTCGCC TTCCAAGGGC CAGCTGCCGT TCTCCACCGA CTGGTTCCTC ACCTGGCAGG AAAACGTCCA CAGCTCCCTG TTCCTGAACA TCTACGAATA CCTGTCCAAG GGTGTGAGCC TGGATTCCGT GGAACTGCTC ACCAAGGCCT ACCGGCTCTA CAGCGAGCAG GTCGCCACGG CCGAGATCGA ACCCCTGTTG TCTTTCACCC GCGCATGGCG CCTGGTGAAG TTCGTGGATG CCGGTATGCT CACGCGCACC AAGTGTTCCC GGTGCGGCGG CCATTTCGTC ACCGAAATGT ACGAAAATCC ACGTGCCTAC ACCTGCGGGC TGTGCAATCC TCCGGCCCGC GCCGGCAAGA GCAAGTCGGC CGGCGCGCTG ATGCTGCACT GA
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Protein sequence | MTAAAAPVKS VLNESKQIER AAMLIQMGAR MQVLESETSL SYERLIRLYK EIAGKSPSKG QLPFSTDWFL TWQENVHSSL FLNIYEYLSK GVSLDSVELL TKAYRLYSEQ VATAEIEPLL SFTRAWRLVK FVDAGMLTRT KCSRCGGHFV TEMYENPRAY TCGLCNPPAR AGKSKSAGAL MLH
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