| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2001 |
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| Symbol | |
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| ID | 4665630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2175390 |
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| End bp | 2177660 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639823212 |
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| Product | YccS/YhfK family integral membrane protein |
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| Protein accession | YP_970359 |
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| Protein GI | 120610681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0304152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00152336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCGA GAACAACGAC AACCACGATG GCGGCGGCCG GCCAGGCGGC GGAGCGCGGG
CGTGCCGGCT GGCTGCGCCG GCTGTGGGCG CAGGACGCCT TCGTTTACAG CCTGCGCGTT
TTCATCGCGC TGAGCGGCGC GATGGCGCTG TGCTGGTGGC GCGACCAGGT GGCGCTGGTG
ACGCCGCTCT TCCTGGGCAT CATCGCCAGC GCGCTGGCAG AAACCGACGA CAGCTGGCGC
GGGCGCCTGC GCGCGGTGTG GGTCATGCTC GCGTGCTTCG CGCTCGCGGC GTTCTCGGTG
CAATTGCTGC TGCCGCATCC GGCCTGGTTC GTGGCGGGCC TGGCATGTTC CACCTTCGGC
TTCACGATGC TGGGCGCCAT CGGCGAGCGC TACCGGGCCA TCGCGTCGGC GACCGTGATC
CTGGCGCTCT ACGCGGCCAT CAGCGCGTCT CCGGGGACGG TGGCCGGGCA CGTGCCGGCC
GGCGGCCCCT GGCATGTACC GCTGCTGCTG CTGTCCGGCG CGGCGTGGTA TGCGCTGCTG
TCGCTGGTGT GGTGCGCGGC GTTCCCGCAC CAGCGCGTGC GGCAGAACCT GGCGGGGCTC
TACGACCAGC TGGGCGCCTA CCTGCGGCTC AAGGCCAGCC TGTTCGAGCC GGTGCGCGGC
GTGGACGTGG AGCGGCGGCG CCTGGCGCTG GCGCAGACGA ACGGCCGCCT GGTGGCGGCC
CTCAATGCCA CCAAGGAAAG CATCTTCAGC CGCTGGGGCG CCGGCGCGCG TGCCCTGCCC
ACGGGGCGGA TGCTGAGGCA CCTGAATCTC TACTTCATCG CGCAGGACAT CCACGAGCGC
GCCAGTTCCT CGCACCACCA TTACAACGAA TGGGCGGACG TGCTGTTCCA CAGCGACGTG
CTCTACCGCT GCCAGCGCGT GCTGCAGCTG CAGGGCGTGG AATGCGCGCG CATCGCCCAG
GCGCTGCAGA TGCACCAGCC CTTCGAGCGG GACGGGGCGG TGGCGCGGGC CATGGCCGAT
CTGCGCGACG CGATCGCCTA CCTGGAAGCC CAGGGCCGGG CCGAATGGCA GCGCCCCCTG
CGCAGCCTGC GCGCGCTGGC GCGCAATCTC GGCACGCTGG ACGCGCAACT CGATGCCGCG
ACCCATCCCG ACGGCGGGGA GCGGGCGGGG GACAGCAGCC TGCTGGACCG CTCCCCGCGC
TCGCTGGCCG ACGCCTGGGG CCGCGTGCGG GTGCAACTGC ACCGCGGCTC GCCACTCTTC
CGGCACGCGG TGCGGCTGTC CCTGGCGCTG GCGGCGGGCC ACGGCGTGAT GCAACTGATC
GATCCCGTGC ATGGCTACTG GATCCCGCTG GCCACGCTGT TCGTGTGCCA GCCCACGTAC
GGCGCGACGC TGGCGCGCGT GGCGCAGCGC ATCGCCGGCA CGGCCGTCGG CCTGGTCGTG
GGCTGGGCGC TGCTGCGCCT GTTCCCGAGC CTGCCGCTGC AGGCGCTCTT CGCGGTGGCC
GCGGGGGTGC TGTTCTTCGT CACCCGCACC ACGCATTACC TGACGGCCAC GGCCGCCATC
ACGCTGCTGG TGCTCATGTG CTTCAACCAG GCCACCGGCG CGGCGAACGG GCTGATCCTG
CCGCGCCTGC TGGACACCAT GATCGGCAGT GCCATCGCCG CGGTGGCGAT GCTGTGGGTG
CTGCCGGACT GGCAGGGACG CCGCCTGGCG GCCGTGGCGG CCCAGGCCCT GGCCGCGCAT
GCCCATTACC TGCGCGAGAT CCTCTCGCAG TACGCCACCG GCAAGTCCGA CGACCTGGAC
TACCGGCTCG CGCGGCGCAA CGCGCACAAC GCGGATGCGG CGTTCTCCAC GACCCTCTCG
CACCTGCTGC AGGAGCCGCG CCACGTGCGA TCGCATTCGC TGGCCGGCAT GCGCATGCTG
GTGGCCTCGC ACACCTTGCT GAGCTATCTC TCCGCCCTGG GCGCGCACCG GGCGGGGCCT
GCGGGCCCTG CCGCGGACCT GGCCCAGGAG GCCGGGGCGC ATGCGGTGGC GCGGCTGGAG
GCGCTGGCGG CCGCGCTGCG CCGGCAGGAG GGGGCTGCGC TGGAGGATGC CGGGCGCGCG
CAGGCGCTGG CGGCCGCGCT GGAACAGGCG GCGGATGCCA TGGCGCTGCG GGGGGATGGT
GGTGCGGGGG AAGTGCCGGC GGAGACGTTG CGCATCCTGC TGACGCAGCT GGCGCTGGTG
TGTGGGCAGA TGGGGGCGAT CGAGGGGGCT GTGCGGGAGT TGTTGGGGTG A
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| Protein sequence | MEPRTTTTTM AAAGQAAERG RAGWLRRLWA QDAFVYSLRV FIALSGAMAL CWWRDQVALV
TPLFLGIIAS ALAETDDSWR GRLRAVWVML ACFALAAFSV QLLLPHPAWF VAGLACSTFG
FTMLGAIGER YRAIASATVI LALYAAISAS PGTVAGHVPA GGPWHVPLLL LSGAAWYALL
SLVWCAAFPH QRVRQNLAGL YDQLGAYLRL KASLFEPVRG VDVERRRLAL AQTNGRLVAA
LNATKESIFS RWGAGARALP TGRMLRHLNL YFIAQDIHER ASSSHHHYNE WADVLFHSDV
LYRCQRVLQL QGVECARIAQ ALQMHQPFER DGAVARAMAD LRDAIAYLEA QGRAEWQRPL
RSLRALARNL GTLDAQLDAA THPDGGERAG DSSLLDRSPR SLADAWGRVR VQLHRGSPLF
RHAVRLSLAL AAGHGVMQLI DPVHGYWIPL ATLFVCQPTY GATLARVAQR IAGTAVGLVV
GWALLRLFPS LPLQALFAVA AGVLFFVTRT THYLTATAAI TLLVLMCFNQ ATGAANGLIL
PRLLDTMIGS AIAAVAMLWV LPDWQGRRLA AVAAQALAAH AHYLREILSQ YATGKSDDLD
YRLARRNAHN ADAAFSTTLS HLLQEPRHVR SHSLAGMRML VASHTLLSYL SALGAHRAGP
AGPAADLAQE AGAHAVARLE ALAAALRRQE GAALEDAGRA QALAAALEQA ADAMALRGDG
GAGEVPAETL RILLTQLALV CGQMGAIEGA VRELLG
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