Gene Aave_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1970 
Symbol 
ID4665674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2139565 
End bp2140623 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID639823180 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_970328 
Protein GI120610650 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.023666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CCGCTTCCTC CACTCCCATT TCGTACAAAG ACGCCGGCGT CGACATCGAC 
GCGGGCGACG CGCTGGTCGA GCGCATCAAG CCGCTGGCGA AGAAGACGAT GCGCGAAGGC
GTGCTGGCCG GCATCGGCGG CTTCGGCGCG CTGTTCGAGG TGCCCAAGCG CTACAAGGAG
CCGGTGCTGG TTTCCGGCAC CGACGGCGTG GGCACCAAGC TCAAGCTGGC CTTCGAGTGG
AACATGCACG ATACGGTAGG CATCGACCTC GTGGCCATGA GCGTGAACGA CGTGCTGGTG
CAGGGCGCCG AGCCGCTCTT CTTCCTGGAC TACTTCGCCT GCGGCAAGCT CCATGTGGAC
ACCGCCGCCG CGGTGGTGGG CGGCATCGCC CGCGGCTGCG AGCTGTCGGG CTGCGCGCTG
ATCGGCGGCG AGACCGCCGA GATGCCCGGC ATGTACCCGG ACGGCGAATA CGACCTCGCG
GGCTTCGCCG TGGGCGCGGT CGAGAAGTCG AAGATCCTCA CCGGCCGCGA AGTGGCTGCC
GGCGACGTGG TGCTGGGCCT GGCCTCCGCC GGCGTGCACT CCAATGGCTT CAGCCTGGTG
CGCAAGTGCA TCGAGCGCGC CGGAGACTCC GCCCCCGCCA CGCTGGACGG CAAGCCCTTC
AGGCAGGCCA TCATGGAACC CACGCGCCTG TACGTGAAGA ACGTGCTGGC CGCGCTGGCG
CAGCACCCCG CCGACGCTGG CGGCATCAAG GCCCTGGCCC ACATCACGGG CGGCGGCCTG
CTGGAGAACA TCCCGCGCGT GCTGCCCGAA GGCCTCGCCG CCCACCTCAA GGCCGGCAGC
TGGCCGCAGA CCGAACTGTT CGCCTGGCTG CAGAAGACGG CCGGCATCGA CGACATCGAG
ATGAACCGCA CCTTCAACAA CGGCATCGGC ATGGCGGTGG TGGTGTCCGC CGCCCAGGCC
GAGGCCGTCG CCGCCACGCT GCGCGCGCAG GGCGAATCCG TGCACGCCAT CGGCGTGATC
GCCGAGCGCG GTACGGGCGC CCCGGTCGTG GTCGCCTGA
 
Protein sequence
MSSSASSTPI SYKDAGVDID AGDALVERIK PLAKKTMREG VLAGIGGFGA LFEVPKRYKE 
PVLVSGTDGV GTKLKLAFEW NMHDTVGIDL VAMSVNDVLV QGAEPLFFLD YFACGKLHVD
TAAAVVGGIA RGCELSGCAL IGGETAEMPG MYPDGEYDLA GFAVGAVEKS KILTGREVAA
GDVVLGLASA GVHSNGFSLV RKCIERAGDS APATLDGKPF RQAIMEPTRL YVKNVLAALA
QHPADAGGIK ALAHITGGGL LENIPRVLPE GLAAHLKAGS WPQTELFAWL QKTAGIDDIE
MNRTFNNGIG MAVVVSAAQA EAVAATLRAQ GESVHAIGVI AERGTGAPVV VA