Gene Aave_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1961 
Symbol 
ID4665297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand- 
Start bp2132038 
End bp2132586 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content71% 
IMG OID639823171 
Producthypothetical protein 
Protein accessionYP_970319 
Protein GI120610641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.656827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0195046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC ATCTTCCCCT CGCGATCGTC GCCACCCTGG GCCTGGCGGC CTGCAGCCAC 
ATGGGCAGTG CCCCGATGGG CGCGTTCTCG CAGGCATCCC TGCCCGCGGC GGTGCAGGTG 
CCCGCCGGCC ACAAGGTGGC CCTGGAAACC GTGGGCAAGG GAGAAATCAC GTACGAATGC 
CGCGCCAAGA AGGACATGGC GGGCGACTTC GAATGGGTGT TCGTCGGCCC GGACGCGAAG 
CTCCATGACC GCAGGGGCGC GGTGGTGGGG CGCTATTGGG GCCCGCCCGC CACCTGGGAA 
AGCAGCGACG GCTCCAAGGT GACCGCCACG CAGGTGGCCG TGGCGCCCGC CGGCACGGGC 
AACATCCCGC TGCAGCTGGT CAAGGCGAAC CCCGCCACGG GCATGGGGGC GATGCAGGGC 
GTGGCCTACA TCCAGCGCGT GGCGACCCAG GGCGGCGTGG CGCCGGCCAT GCCCTGCGCG 
GCGGGCAACG CCGGGCAGAA GCAGATCGTG AAGTACCAGG CCGACTACAT CTTCTGGCGC 
GCCGCCTGA
 
Protein sequence
MRIHLPLAIV ATLGLAACSH MGSAPMGAFS QASLPAAVQV PAGHKVALET VGKGEITYEC 
RAKKDMAGDF EWVFVGPDAK LHDRRGAVVG RYWGPPATWE SSDGSKVTAT QVAVAPAGTG 
NIPLQLVKAN PATGMGAMQG VAYIQRVATQ GGVAPAMPCA AGNAGQKQIV KYQADYIFWR 
AA