| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1957 |
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| Symbol | |
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| ID | 4668707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2125134 |
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| End bp | 2127488 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639823167 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_970315 |
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| Protein GI | 120610637 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0162399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCC TCGCTTTCCT GCGCCACCGG GCGCGCCGTC CCGGCACTGA AGCACTGGCT
GTCCTGCCGC TGTGCCTCGC GCTCTGGGCG CCGCTGCCGG CCCGCGCCCT GCCGGCCTAT
GCCGAGGTGC GCGCGGACTA CCGCTCGTCC GAAACCCTGG TGCTCTCGCG CGAAGGCGAG
GTGGTGCAGC GGCTGCGGAC CGATGCCACC GTGCGGCGCG GCCAGTGGAC GGGGCTGGAC
GACATATCGC CCGCGCTGCG GGAGGCGCTG GTGCTCAGCG AGGACCGGCG CTTCTACGAG
CACAGCGGCG TGGACTGGCG CGCCGTCTCG GCCGCCGCCT GGGGCAATCT GTGGAACCAG
CGCACGCGAG GCGCTTCCAC CCTGACCATG CAACTCGCCG GCCTGCTGGA CGGCGACTGG
CGTCAGGGGC CCGGCGGCCG GTCGGTGGCC CAGAAGCTCG GGCAGACCGT GGCCGCGCAG
GTGCTGGAGA GGCGCTGGCG CAAGGACCAG ATCCTGGAGG CCTACCTCAA CCTCGTGCCC
TTCCGGGGCG AACTGGTGGG CATCGACGCA CTGTCCCGCA CGCTGTTCGG CAAGGCGCCG
CATGGGCTGG ACGACCGCGA GGCCGCGGTC GCCGCGGCGC TGGTGCGGGC GCCGAACGCC
CGGCCCGCGC TCGTGGCCCA GCGCGCCTGC GGCGTGCTGC GTTCCATGGC CGGGCAGGCC
GGCGGTGGCG GCGGCCGTCC CGCGCCATCG TCCATGGACT GCGATGCGCT GGACCTGTTC
ACCACCGCCG CGCTGCAGCG CCGGGATTAC GCGGCCAGCG AGGGCGTGGC TCCGCATTTC
GCGCGCCAGC TGCTGGCGCG CATGGAAGGG CCGCCTCCGG CGTCCGTCGT GTCCAGCCTC
AGCGCGCCGC TGCAGCGCAT GGCCGTTCAG TCGCTGCACC AGCACCTGCG CGAGCTGCAC
GGCCGCAACG TGGAGGACGG CGCCGTGGTC GTGCTCGACA ACGCCACCGG CGAAGTGCTG
GCGTGGGTGG GGTCGTCCGG CCTGTTGAGC CAGGCGGGAG AGGTGGACGG GGTGCTGGCC
GCGCGCCAGC CGGGCTCCAC GCTCAAGCCC TTCCTCTACG CCCAGGCGAT CGCGCAGCGC
CGCATCACCG CCGCGTCGCT GATCGAGGAT TCGCCCGCGT ACATACCCAC CGCCTCGGGG
CTCTACATCC CGCAGAACTA CGACCGGCAG TTCAAGGGCT GGGTGTCCGC GCGCACCGCC
CTGGCCGCCT CGCTCAACGT GCCGGCGGTG CGCACCCTCG CCATGGTCAC TCCCGACGCC
TTCTTCCGCC AGTTGCAGGC CCTGGGCCTG CCGCTGCGGG AGACGGGCGA CTACTACGGC
TACAGCCTCG CGCTGGGCAG CGCCGAGGTG CCTCTGCTCC ACCTGGCCAA TGCCTACCGC
GCGCTCGCCA ACGGCGGCCG GCCCGGTCCC GCCGTGTTAC GTCCCGCCGC TGCGGGCACG
CGGCGCACGG GCACCAGGCC GGCCCCGGCC GCGGCGACGG AGGCACCCCC CGCGGTCGAT
CCGCGCGCGG CCTTCATCGT GGGCGACATC CTTTCGGACG GCAATGCACG CGCGCGCACG
TTCGGCACCG ACAGCGTGCT GGCCACGCGG TTCTGGAGCG CGGTGAAGAC CGGCACCAGC
AAGGACATGC GCGACAACTG GGCGCTGGGC TGGTCGCAGC GCTACACCGT GGGCGTGTGG
GTGGGCAATG CGGGCGGGGC GCCCATGCAC GACGTGAGCG GCACCAGCGG CGCGGCGCCC
GTGTGGGCCG AGATCATGGG CTGGCTGCAC GGCCGGGGCG TGCGCAGCCG CCCGCCCGAG
CCACCGCCCG GGCTGGTCCG CGCCGCCGTG CGCTTCGGCC CCGAGCCGGG CGGCACGCGC
CTGCTGGAAA GCGCGCGCCA GGAATGGTTC CTCGCCGGCA CGCAGCAGTC GCTCTTCGCC
GTGGATGCGG GCCCCGGCAC CGTCCGGCGG GGGCGCGCGG CGCCGGAGCC GGCAGCCGGC
GAGGGCGGTG CGCCGGACGG CCTGCAGGCC CCGCAGCCGC GCATCGTGTC GCCCGCCACG
GGCACCATCG TGGCGCTGGA CCCCGACATC CCTCCCGCCC ATCAGCGCCT GCAGTTCGCC
GCCGCGGGCG GCGGCGTGCC GGGGACGCTG CGTTGGCGCA TCGACGGCCG GGTGCAGGGC
CGGGGGGCGG AATGGGCCTG GCTGCCCTGG CCCGGACGCC ACCGGGTGGA GCTGGTGGAT
GCGGGAGGGC AGGTGGTGGA CGAGATCCGC ATCGAGGTGC GGGGAGCGGG CGTGGTGAAA
GGGCCCCGCC CCTGA
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| Protein sequence | MPFLAFLRHR ARRPGTEALA VLPLCLALWA PLPARALPAY AEVRADYRSS ETLVLSREGE
VVQRLRTDAT VRRGQWTGLD DISPALREAL VLSEDRRFYE HSGVDWRAVS AAAWGNLWNQ
RTRGASTLTM QLAGLLDGDW RQGPGGRSVA QKLGQTVAAQ VLERRWRKDQ ILEAYLNLVP
FRGELVGIDA LSRTLFGKAP HGLDDREAAV AAALVRAPNA RPALVAQRAC GVLRSMAGQA
GGGGGRPAPS SMDCDALDLF TTAALQRRDY AASEGVAPHF ARQLLARMEG PPPASVVSSL
SAPLQRMAVQ SLHQHLRELH GRNVEDGAVV VLDNATGEVL AWVGSSGLLS QAGEVDGVLA
ARQPGSTLKP FLYAQAIAQR RITAASLIED SPAYIPTASG LYIPQNYDRQ FKGWVSARTA
LAASLNVPAV RTLAMVTPDA FFRQLQALGL PLRETGDYYG YSLALGSAEV PLLHLANAYR
ALANGGRPGP AVLRPAAAGT RRTGTRPAPA AATEAPPAVD PRAAFIVGDI LSDGNARART
FGTDSVLATR FWSAVKTGTS KDMRDNWALG WSQRYTVGVW VGNAGGAPMH DVSGTSGAAP
VWAEIMGWLH GRGVRSRPPE PPPGLVRAAV RFGPEPGGTR LLESARQEWF LAGTQQSLFA
VDAGPGTVRR GRAAPEPAAG EGGAPDGLQA PQPRIVSPAT GTIVALDPDI PPAHQRLQFA
AAGGGVPGTL RWRIDGRVQG RGAEWAWLPW PGRHRVELVD AGGQVVDEIR IEVRGAGVVK
GPRP
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