Gene Aave_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1955 
Symbol 
ID4667202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2122550 
End bp2123044 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID639823165 
Producthypothetical protein 
Protein accessionYP_970313 
Protein GI120610635 
COG category[S] Function unknown 
COG ID[COG4922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.252213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00353589 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTGA AACTGCTGCT CTCCCGCGCC GTGCTGGCCT TCGCGGCCGC CGCGTGCCTT 
TCCGCCCACG CCCAGGTGCC CGTGGCGGAA GAACCGAACC ACGACAAACT GCTGTGGTCC
CACAACCCCA TCCTCGCGCA CAACAAGCGG CTGGTGTACG ACTTCTGGAG GGAAGTATTC
GAGTCCGGCC AGGTGGAGCT TGCCGATCGC TACATGAAGG AGGACTACAT CCAGCACAAC
CCGCTGGTGG CCACCGGTCG CGAGCCCTTC AAGCAGTTCC TGGCGCAGGT CACGCCGCGC
TCGCCCATCC AGCCGCGGGT CAAGGCCCCG CTGGTACGCA TCCTCGCGGA GGGTGACATG
GTCACCATGG TCTTCGCCCG CCGGCTGCCC GATCCGCGGA ACCCGGGCCA GACCTACACC
ACCACCTGGT TCGACATGTT CCGCATTCAG GACGGGCAGA TTGCCGAACA CTGGGACGCG
GCCACCAGGA ACTGA
 
Protein sequence
MTVKLLLSRA VLAFAAAACL SAHAQVPVAE EPNHDKLLWS HNPILAHNKR LVYDFWREVF 
ESGQVELADR YMKEDYIQHN PLVATGREPF KQFLAQVTPR SPIQPRVKAP LVRILAEGDM
VTMVFARRLP DPRNPGQTYT TTWFDMFRIQ DGQIAEHWDA ATRN