| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1948 |
|---|
| Symbol | |
|---|
| ID | 4669872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2110134 |
|---|
| End bp | 2111198 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639823158 |
|---|
| Product | histidine kinase internal region |
|---|
| Protein accession | YP_970306 |
|---|
| Protein GI | 120610628 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.78828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00774821 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGA CCCAAATTTT ATCGACCCGG CCCCAGCCCC TGGCAGAGCC CCCTCCGGAG
GGGCTCGGCG GGCGGGCGCT CGTCTTCGAT GCATGCCACG TCGGCGTGGT GCTGCGCGCC
GTGCTGTTCG TGGAGATCGT GCTCGGCGTG GGCGCGATGT ACGGCGCCGA CGGCCCGGCC
GCGTGGCTGG CCCGGCTGTC GCTGCTGACC GGCGGCGCGC TGCCGGCGAC CCTGGCCTGG
CTGGTCACGG CCTGCAGCCT CAAGACCCTG CTGCAGCGCC TGCCCGTGGC GCTGCAATCC
GCGGCCGGCG TGGGCCTGGG GACGCTGGCC GGCCTCTACG CCTGCGGCAT GCTGGTGCTG
GTCGGCGTGC CCATGGAGGC ACCCTGGCTG GCCAGCGCCG CGAGCGGGGC GCTGCTGTCG
GCACTGCTCG TGGCGGCGCT GGTGCTGCGC GCCCGGGCAC GCACGCCGGC CGCCACCACC
GCGCGGCTCG GCGAACTGCA GGCGCGCATC CGGCCGCACT TCCTCTTCAA TACCCTCAAC
AGCGCCATCG CGCTGGTGCG CGACGAGCCG GCCAGGGCCG AGGCCCTGCT GGAAGACCTG
AGCGACCTGT TCCGCCATGC CCTGGTGGAA CAGGGCGACT CCGCGACGCT GGGCGAGGAG
ATCGTGCTGG CGCGGCGCTA CCTCGCCATC GAGGAAGTGC GCTTCGGGGA GCGCCTGCGC
GTGCAATGGC TGCTCGACCC GCGCACCGAC GGCGCCCGGC TGCCGCCCCT GCTGCTGCAG
CCGCTCGTGG AAAACGCCGT CAAGCACGGC GTGGAGCCCT CCGCCCATGG GGGCAAGCTG
CGCGTGACGA CCGAGCTGCG CGGCAGCCGC GCCGTGGTCA CCATCACCAA CACCGTGCCG
CCCGGCGGGG CCCGCGCGGG AGAGGGCGCA CCCCGCGGCC ACGGCATCGC CCTGGCCAAC
GTGCGCGACC GGCTGCGCCT GCTGCACGAT GTGCAGTGCG ATTTCTCGGC GGGCATGCAC
AATGGCCTCT ACCGGGTACG CATCTCCCTG CCGGCGCATC CCTGA
|
|---|
| Protein sequence | MQETQILSTR PQPLAEPPPE GLGGRALVFD ACHVGVVLRA VLFVEIVLGV GAMYGADGPA
AWLARLSLLT GGALPATLAW LVTACSLKTL LQRLPVALQS AAGVGLGTLA GLYACGMLVL
VGVPMEAPWL ASAASGALLS ALLVAALVLR ARARTPAATT ARLGELQARI RPHFLFNTLN
SAIALVRDEP ARAEALLEDL SDLFRHALVE QGDSATLGEE IVLARRYLAI EEVRFGERLR
VQWLLDPRTD GARLPPLLLQ PLVENAVKHG VEPSAHGGKL RVTTELRGSR AVVTITNTVP
PGGARAGEGA PRGHGIALAN VRDRLRLLHD VQCDFSAGMH NGLYRVRISL PAHP
|
|---|
| |