| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1944 |
|---|
| Symbol | |
|---|
| ID | 4669903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2105384 |
|---|
| End bp | 2106334 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639823154 |
|---|
| Product | zinc/iron permease |
|---|
| Protein accession | YP_970302 |
|---|
| Protein GI | 120610624 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0428] Predicted divalent heavy-metal cations transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000552942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00979273 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCGCTTTC CTGGCGGGCC GGATGCCGGC CGCGGCAAGC CCTGTGTTTT CGAGAATCGA
GCGCGTACAG CTATGACTTT GATCGCAATC ATCCTGGCCA CCCTGGCCGC GGGTATCGGC
AGCGTGTGGG TGGCGGCCCT GCTCATGCGG GCCGGCTGGG GGGACGGCCG CTCGGGCATC
GGCCCGCGGC ACCTCCTGAG CTTCGCCGCC GGCGCGCTGC TGGCCACGGC CTTCATGCAT
TTGCTACCCG AGGCCTTCGA GAGCCAGGCC GGCGCGCACG AACTCTTCGC CACGCTGCTG
GTGGGGCTGG TCTTCTTCTT CCTGCTGGAC AAGGCGGAGC TCTGGCACCA CGGCCACGAG
CACGGCGTGG GGCCGGCCAA CGACGACCCG GGTACGGGGG GAGGGCACGC GCACGCCCAT
GGACACACCC ACGATGGCCA CGGGCACGAT GCACACGGCC ATGGGCACCA CTCCCACGCC
CATTCCCACT CGCATCGCGG CTCCGGCGGC TGGGCCCTGC TCACGGGCGA CAGCGTCCAC
TGCTTCGGCG ACGGTGTCCT GATTGCCTCC GCCTTCCTGG CCGACCTGCG CCTGGGCGCC
ATCGCCGCGC TGGCCGTCCT GGCCCACGAA GTGCCGCACC ACATGGGCGA TCTGGTGGTG
CTGCGCCAGT CCAGCGGCGA CCGGCGCGCG GCCCTGGTCA AGGTGTCCCT GGCCGGAGCG
GTCACCGCGC TCGGGGGCGT GGTGGGCTAT TTCCTGGTGG GCGAGCTGCA GGACTGGCTG
CCGTATTTCC TGGCCATCGC GTCCAGCAGC TTCGTCTATG TGGCGCTGGC CGACCTCATC
CCCCAATTGC AAAAGCGCCT GACGGCCGCG CAGACGCTGG CGCAGATCGC GTGGCTGCTG
GGGGGCATGG CGGTGGTCAC GCTGGTGAGC GGGATGGCGC ACGCACATTA A
|
|---|
| Protein sequence | MRFPGGPDAG RGKPCVFENR ARTAMTLIAI ILATLAAGIG SVWVAALLMR AGWGDGRSGI
GPRHLLSFAA GALLATAFMH LLPEAFESQA GAHELFATLL VGLVFFFLLD KAELWHHGHE
HGVGPANDDP GTGGGHAHAH GHTHDGHGHD AHGHGHHSHA HSHSHRGSGG WALLTGDSVH
CFGDGVLIAS AFLADLRLGA IAALAVLAHE VPHHMGDLVV LRQSSGDRRA ALVKVSLAGA
VTALGGVVGY FLVGELQDWL PYFLAIASSS FVYVALADLI PQLQKRLTAA QTLAQIAWLL
GGMAVVTLVS GMAHAH
|
|---|
| |