| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1931 |
|---|
| Symbol | |
|---|
| ID | 4666109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2094506 |
|---|
| End bp | 2095180 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970289 |
|---|
| Protein GI | 120610611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0367641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0184449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTCC ATCGATTCAC TCAACACACG CGCTATTCCA TGCAATACGC TCTTCGCACC
CTGGCGCTCG CTGCCCTGCT CGCACCGGCA TTCGCCGGCG CCGCCACGAT CGTCAGCTGT
CCGGCCAACA CCAATACGGG TGGCGACGGC ATCTCGCGGT CTTTCTATCT GCCCAACTAC
GCCGGCACCA CCCTCGACAC CGTGACGGTG AACTATGGCA CGGCGACCGC GGGCAGCTAC
ACCGTGGCGC TCGAAGCGCG GCTGAACGCA TTCGACGGCA CGCTGGTCGG CACCGCGAAT
TCGACCACCA CGGTTGCCGC AGCGAGCGTC GCCGGCGGCA CGCCCTTCAC GTTCAATTTC
AACAACGTGG CGATTCCGGC GAACTCCACC ATCACGTTCA AGCAGACGCT GATCGCCGGT
CCGGGCTCGC TGTCCAATAA TACCGGCCAG GCACCTTGTA CCGGCACCGT GACGCAGACC
AACGGTTCCA CTCCGCCCCT CGACAGCGCC CGCCGTGCCA CTCTGGCGAT TACCGTGACG
GGCAGCACTA CGCCCGTAGG CGGTGGCGGC GGCACGGTGG CGAGCATCCC GACGCTCTCC
GAATGGGGCA TGGTCCTGCT GTCCGGGCTG CTGGCGCTGT TCGGCGTCGC CCGGATGCGC
CGTCGCGGCC GCTGA
|
|---|
| Protein sequence | MHFHRFTQHT RYSMQYALRT LALAALLAPA FAGAATIVSC PANTNTGGDG ISRSFYLPNY
AGTTLDTVTV NYGTATAGSY TVALEARLNA FDGTLVGTAN STTTVAAASV AGGTPFTFNF
NNVAIPANST ITFKQTLIAG PGSLSNNTGQ APCTGTVTQT NGSTPPLDSA RRATLAITVT
GSTTPVGGGG GTVASIPTLS EWGMVLLSGL LALFGVARMR RRGR
|
|---|
| |