Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1927 |
Symbol | |
ID | 4665822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2089006 |
End bp | 2089821 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639823137 |
Product | hypothetical protein |
Protein accession | YP_970285 |
Protein GI | 120610607 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0164957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC ACATCGTCCC TGCCCGCGCC GGCCTGGAAT GGGTCCGCCT CGGCATTCGC ATCTTCTGGC GCCAGCCGAT GGCGCTGGCG GCCCTGTTCT TCCTGACCAT GGCGGCGATG TCCATCGCCA CGCTGCTGCC GCTCGTCGGG CCCGCCGTGG CCCTGGCACT GCTGCCCTCC GCCACGCTGG CCATGATGGT GGCCGCCGGC GACGCCACGC AGGGACGCTT TCCCACCCCG GCCCTGCTGC TGGTGGCCTT CCGCACCGGC CGGCAGCGCC TGCGCTCCAT GCTCGTGCTC GGCGCGCTCT ATGCCGTCGG CTTCCTCGCC GTCATGGCCA TCTCCGCGCT GCTGGACGGC GGACAGTTCG CGCGCGTGTA CCTGGGCGGC GAGGAGCTCA CGCGCGAAAT GGCCGAACTG CCGCAGTTCC AGGCGGCGAT GTGGCTCGCG CTGGCGCTCT ACGTTCCGCT GTCGCTGCTC TTCTGGCACG CGCCCGGCCT GGTGCACTGG CACGGCGTGC CGCCGGTGAA GGCGCTGTTC TTCAGCATCG TCGCCTGCCT GCGCAACATC GGGGCGTTCA CCGTGTACGG CCTTGCATGG ACGGGGGTCT TCCTGGGCGC GGGCATCGCC GCCAGCGTAT TCGTGACGCT GCTGGCCCTC ATGGGCCTGG GCAGCGCGCT CGCGGCGGGC ATCATGGTCG GCACGGCCAT GCTGCTGGCC GCCATGTTCT TCACGTCGGT GGTGTTCTCG TTCCGCGACT GCTTCGAGCC GCCCGAGCGT CCCGCCGCGC TGGAGGACGC CCCGGGCGCG GCCTGA
|
Protein sequence | MKLHIVPARA GLEWVRLGIR IFWRQPMALA ALFFLTMAAM SIATLLPLVG PAVALALLPS ATLAMMVAAG DATQGRFPTP ALLLVAFRTG RQRLRSMLVL GALYAVGFLA VMAISALLDG GQFARVYLGG EELTREMAEL PQFQAAMWLA LALYVPLSLL FWHAPGLVHW HGVPPVKALF FSIVACLRNI GAFTVYGLAW TGVFLGAGIA ASVFVTLLAL MGLGSALAAG IMVGTAMLLA AMFFTSVVFS FRDCFEPPER PAALEDAPGA A
|
| |