| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1920 |
|---|
| Symbol | |
|---|
| ID | 4667216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2079490 |
|---|
| End bp | 2080344 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823130 |
|---|
| Product | aspartyl/asparaginyl beta-hydroxylase |
|---|
| Protein accession | YP_970278 |
|---|
| Protein GI | 120610600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0234553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0031791 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CCACGCACAC CTCCCGGGCC CGGCACGGCG GTGCCACGGC GGAGTTTCCG
CATGCACGGC GCGTTGCCTG CGGTATCGAC ATGACCGCCG CGCTGGCGGA GATCGATGCG
CTGCCGGACG CCCAGTGGGG CCCGCACTTC AACCGTGCCA GGCACGACGG CGGCTGGCAC
GTGGCCGCCC TGCGCAGCGC GCCCCGCTCG CCCCTGGCCA GCGCACCCGG GGAGTTCTCC
GCCGACCTCT ACCAGGACGG TGCCGCGATG GCGCAGTGCC CGTCCGTGCG CTCGCTGGTG
GCCGCCATCG CGGGCGACGC GCCCCTGAAA TCGGTGCGGG TGCTGCGGCT GGCCCCGGGG
GGAACCATCC TCGAACATAC CGACGCGGGC GTCGGCCTGC GGCACGGCGA GGTCCGCCTG
CACCTGCCGC TGCGCACGCA CGACGAGGTG TTCTTCCATG TGGGTGGCGA GCGCGTGCCC
ATGCGCGCCG GGGAATGGTG GTACGCCGAT TTTTCCCTGC CCCACCGCGT AACCAACCGG
GGAGCCCGCG AGCGCCTGCA CCTCGTGGCC GATTGCGCGG CCACGCCCGC GCTGCGCGAG
GCCATCGCCG CGGGAGACCC GGGCACGCCA CTGCCCGAAG CGCACGATCC GCAGTGGCAG
TTCACGCAGT TCCGCCAGCA GGTCTTCGGG GATCCGGCGC TGCAGGAACG CCTGATCGGC
ATCCGCTCGC GCGAGGATTT CGCGCAGGCC TGCGTGCGAC AGGGCCGGGC CCTGGGCCGG
GACTTCACCG AGGCGGAAGT GCTGTCCGCC ATGGCCTGCG GACGCGATGC ATGGATGCGG
CAATGGATCG TCTGA
|
|---|
| Protein sequence | MTETTHTSRA RHGGATAEFP HARRVACGID MTAALAEIDA LPDAQWGPHF NRARHDGGWH
VAALRSAPRS PLASAPGEFS ADLYQDGAAM AQCPSVRSLV AAIAGDAPLK SVRVLRLAPG
GTILEHTDAG VGLRHGEVRL HLPLRTHDEV FFHVGGERVP MRAGEWWYAD FSLPHRVTNR
GARERLHLVA DCAATPALRE AIAAGDPGTP LPEAHDPQWQ FTQFRQQVFG DPALQERLIG
IRSREDFAQA CVRQGRALGR DFTEAEVLSA MACGRDAWMR QWIV
|
|---|
| |