Gene Aave_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1909 
Symbol 
ID4669443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2065837 
End bp2066940 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID639823118 
Producthypothetical protein 
Protein accessionYP_970267 
Protein GI120610589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0658384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000304733 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTAATG TTCTTAAAAA AGGGCCCAGC ATGGAAGAGG CTTTGAGGAC CTATTTTTCC 
CAAGCGGGAT ATTTTGTAGT CCGAGGTGTT CCATTCAAAT ACATGGGACA GGATGTTACG
GATATCGATG CGTGGATCTA TAGTAGAAGT TCGCCGGTAT CTCGCGAAAT AGCGATTGTT
GACATCAAGA ACAAGAAAAC ACCACAGGCT ATTGAGCGAA TTTTTTGGAC GCTCGGGCTC
CAAAAAACCA TCGGCGCAGA TCGCGCCATT GTTGCCACGT CCGATAAAAG ACCAGAAGTC
AAGGAATTTG GCAAGCGCTT AAATATCTTG GTCTTAGATG GAAACTTCTT ATCCAAGTTA
GAGCAGAAAA AACGTTGGGA TGAGCGCATT TCTGACGAGG AATTTTTCAG TCTTCTATCG
GTAAACACTT TTGGGAAATT AGATGGAGAT TGGCGAGGGC GTATTTCTTA TTGCAAGTCT
TTGTTGAGCC GAGGATTATC ATTCGACATA TGCAACGACT TACTTTCCCA AGGGCGCTAT
TTTGCCGAGA TAGCCATTAC CAGACGTGAA CATTCTTCAA CCGCCCTTCG GTGTTTGTAT
TTCATTTGCG CACTGGTTTG CATATGCATA GATTATCTTA TGCGCGGTAT TGCATTCGAA
GAATCGAATG AGCGGGCCGC TCTTTTAGAT GAAGGCTTTC GATACGGCTC CCGGGGCAAA
GAAGGATTTG ATTCCACCGT CAATTTATCG ATGGGCTTAA TTACTGAATA CGCTGCTGGC
GGAAAAGCTT TAGCCGGACA GATTAAGTTC AAGATTCAAG GCAGTCTTAA TCAAATCCCT
GCTTCTGCTT TGGGGGAATT TTTTGCCAGA CGTGATGTCT TTGGGGGACT ATTTGGAGTT
GCAAAGGAAC TCGAAGAGTT GGCGATGTAC AGATTATTCC GCGACCACGC AGTAGCGTCC
TCGTTATCGA AAAGCGTAAT CGGATGTTTG CTTGATTACT GGAGCATCGA TAGGACGCAC
TTGTCGATCA TAGACCCAGA AGCGGGAGTT CAGCCATCCT TACTTTCGGT ACCGCCACCA
GTTCAAGGAG AGGAACAGTC ATGA
 
Protein sequence
MANVLKKGPS MEEALRTYFS QAGYFVVRGV PFKYMGQDVT DIDAWIYSRS SPVSREIAIV 
DIKNKKTPQA IERIFWTLGL QKTIGADRAI VATSDKRPEV KEFGKRLNIL VLDGNFLSKL
EQKKRWDERI SDEEFFSLLS VNTFGKLDGD WRGRISYCKS LLSRGLSFDI CNDLLSQGRY
FAEIAITRRE HSSTALRCLY FICALVCICI DYLMRGIAFE ESNERAALLD EGFRYGSRGK
EGFDSTVNLS MGLITEYAAG GKALAGQIKF KIQGSLNQIP ASALGEFFAR RDVFGGLFGV
AKELEELAMY RLFRDHAVAS SLSKSVIGCL LDYWSIDRTH LSIIDPEAGV QPSLLSVPPP
VQGEEQS