Gene Aave_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1908 
Symbol 
ID4667905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2065265 
End bp2065786 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID639823117 
Producttransposase, IS4 family protein 
Protein accessionYP_970266 
Protein GI120610588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.221251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000248435 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCCGAT TGGAGCTGGG CGAGCATCGA TGGCTCGTCG GTGCCAAGCC CCCGGGGGGC 
CAGGAAACGG GCCCCAACCC CACGGACAGG GGAAAACTCG GCTCCAAGCG GCACATCGTC
GTAGACGCGC GGGGCATTCC GCTGGTGGTG CTGGTCAGCG GAGCGAACCG GCACGATTCG
ATGATGTTCG AGAAATGCAC CAATGCTTTG CCGGCCATCA AGGGGCTGCG AGGCAAGCCG
CGTTGCAGGC CATCGAGGCT GCATGCCGAC AAGGGCTACG ACTACGCGCG CTGCCGTGCC
TATCTGAAGA AGCGAGGCAT CGCCAGCCGG ATTGCCAGAA GAGGCGTCGA GAGCCGCGAG
CGGCTGGGTC GGCATCGCTG GGTGGTGGAG AGAACCCATG GATGGTTTGC AGGCTTTGGC
AAGCTGCGCA TTCGCTTCGA GCGGCGGCTG GACATCCACG AAGCGCTGTT GAAACTGGCT
GCAGCGATCA TCTGTGCGCG CTTGGTGGAT CGGTGGTGTT AG
 
Protein sequence
MLRLELGEHR WLVGAKPPGG QETGPNPTDR GKLGSKRHIV VDARGIPLVV LVSGANRHDS 
MMFEKCTNAL PAIKGLRGKP RCRPSRLHAD KGYDYARCRA YLKKRGIASR IARRGVESRE
RLGRHRWVVE RTHGWFAGFG KLRIRFERRL DIHEALLKLA AAIICARLVD RWC