| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1899 |
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| Symbol | |
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| ID | 4665509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2054974 |
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| End bp | 2056380 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639823108 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_970257 |
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| Protein GI | 120610579 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.133432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0640965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAC TCGCTCTTGG AGCCCGACAG ACCCAGACCC CGCACCTTTC GCCCCGCCTC
CAGAAGGCTG TGCAATTGCT GCAGATGCCG ACGGCGGAGT TCATCCAGAG CGTGATGGCT
GCCGTGGACG AGAACCCGTT CCTCGAGGAA GACGAGGCGG CGGCACCTGC TGCCCCCGGC
CCGGAAGAGG GGCCGGCCTG GACCGCGGCA CCGGGCTCCC GGTCGCCCCA GGCCGGCAGC
GGCGACGGCC TGTCCATGCT GGACCGCGAA CCGGCGACGG CCACGCTGCA GGAACACCTG
CACTCGCAGT TGCGCCTGCT GCGCCTGCCC GACCGCGCCT TTCTCCTGGC GAGCCTGGTG
GTCGAAGAGT TGTCCGATGA CGGCTACCTG CTGGCCTCCC TGGACTCCCT CTGCAGGGAC
TACGGCGTGG AGCCGGAGGC CACGGCCGAG GAGCTGGACG CCGCGCTGCG CACCGTGCAG
TCCCTGGAGC CCGCGGGCGT GGGTGCGCGC GACCTGCAGG AATGCCTGCG CCTGCAGCTG
CCCGCAGTCG CCTGCCCGCT GCAGCGTGCG CTGTGCGATG CGGTACTGGC CAGGGCGGCG
GAAGGGTCCG GGCCGCAGGC CATGCGGCAG CTGGCGGCAC GCCTGGATGT ACCCGCGCAT
GCCGTGCGCG AGGCAATGGA GCGGCTGCGG CACCTCGACC CCCACCCGGG ATGGCGGCAC
GGGTCCCAGC CGGTGCAGTA CATCATGCCC GATGTCATCG CGCACAAGGC CCGCGGGCAG
TGGACCGTCT CGCTGAACGA GGCCGTCATG CCGCGCGTGC GCGTCCATCG CCAGTACCAG
CAGTTGCTTC AGTCGCCGGC CGATGCGCCG GACGGGCCGG CGCCCGCTCC GGAAGACACC
GGAGCGCGCA ACGCGCACCG CGATCTGGCG GCGCAACTGG CCGAGGCGCG CTGGACCGTC
CGCCATGTGC AGCAGCGCTT TTCCACCGTG CTGGATGTCG CCAGGGCGAT CCTGCGCCGG
CAGCCCCACT TCCTGGAATA CGGCCCCATC GGCATGCGAC CGCTGGCGCT CAAGGACATC
GCGGAAGAAT TGGGGGTGCA TGTCTCCACC GTATCGCGGG TGACGAACAA CAAGTACCTG
CAGACGCCGT TCGGCTTGTT CGAACTGAAG TACTTCTTCT CCCGCGCCAT GACCACGCCG
GCAGGGCGGG ACAGTTCGCC CACCGCCATC CGCGGGCTCG TGCAGGAAAT CCTGGCGGCG
GACGACGGCC AGCGGCCGCT CTCCGACGTG GACATCGCAC GGCAGCTCGA GCGCCAGGGT
ATCCGCATCG CGCGCCGCAC GGTGACCAAG TACCGGCAGC AACTGCGCAT TCCGCCCGCA
GAGCAGCGTG CCGCGGCGCG TCCCTGA
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| Protein sequence | MPTLALGARQ TQTPHLSPRL QKAVQLLQMP TAEFIQSVMA AVDENPFLEE DEAAAPAAPG
PEEGPAWTAA PGSRSPQAGS GDGLSMLDRE PATATLQEHL HSQLRLLRLP DRAFLLASLV
VEELSDDGYL LASLDSLCRD YGVEPEATAE ELDAALRTVQ SLEPAGVGAR DLQECLRLQL
PAVACPLQRA LCDAVLARAA EGSGPQAMRQ LAARLDVPAH AVREAMERLR HLDPHPGWRH
GSQPVQYIMP DVIAHKARGQ WTVSLNEAVM PRVRVHRQYQ QLLQSPADAP DGPAPAPEDT
GARNAHRDLA AQLAEARWTV RHVQQRFSTV LDVARAILRR QPHFLEYGPI GMRPLALKDI
AEELGVHVST VSRVTNNKYL QTPFGLFELK YFFSRAMTTP AGRDSSPTAI RGLVQEILAA
DDGQRPLSDV DIARQLERQG IRIARRTVTK YRQQLRIPPA EQRAAARP
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