| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1886 |
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| Symbol | trmD |
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| ID | 4669343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2042193 |
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| End bp | 2042960 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639823095 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_970244 |
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| Protein GI | 120610566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000334711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTCG ACGTCATCAC GCTGTTCCCG GAGCTGTTCA CGCCGTTTCT CGCCAGCGGC
GTGACGCGAC GGGCCTATGC CACCGGGCTC GTGGACGTGC GCTTCTGGAA CCCGCGCGAC
TACGCGGAGG GCAACTACCG CCGCGTGGAC GACCGCCCCT TCGGCGGAGG GCCGGGCATG
GTCATGATGG CCGAGCCGCT CGAGCGCTGC CTGCGGGCCA TCCGCGCGGA CCGCGGCGAG
GCGCCCGAGG CCGTGGCGCC ACTGGTGATG TTCTCGCCGA TCGGGCGCAG GCTGGACCAT
GACGGCGTGG CGGGCTGGGC CGCCGGCAAC GGCGCAGTGC TGCTGTGCGG CCGCTACGAG
GGCGTGGACC AGCGGTTCGT CGATGCCCAT GTGGACGTGC AGCTGAGCCT GGGGGATTTC
GTCCTCTCCG GCGGCGAGAT CCCCGCCATG GCGCTGCTCG ACGCGGTGGC GCGGCTGCAG
CCCGGCGTGC TGAACGATGC CGGCAGCCAC CAGGAAGACA GCTTCAATGC AGCGCTGGAC
GGCCTGCTGG ACTGTCCGCA CTACACCCGT CCGGAGTCGT GGCAGGGGCA GGCGGTGCCC
GCCGCGCTGC TGTCCGGCCA CCATGCGCAG ATCGAGCGCT GGCGGCGCGA CCAGCGGCTT
GCCGTGACGG CGCGGCACCG GCCGGACCTG GTCGAGGCCG CGCGCGTGGC GGGGCGCCTC
GACCGCGCGG ATGAAGCCGT CTTGGCGAAA CTGAACGGCT TGCTATAA
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| Protein sequence | MRFDVITLFP ELFTPFLASG VTRRAYATGL VDVRFWNPRD YAEGNYRRVD DRPFGGGPGM
VMMAEPLERC LRAIRADRGE APEAVAPLVM FSPIGRRLDH DGVAGWAAGN GAVLLCGRYE
GVDQRFVDAH VDVQLSLGDF VLSGGEIPAM ALLDAVARLQ PGVLNDAGSH QEDSFNAALD
GLLDCPHYTR PESWQGQAVP AALLSGHHAQ IERWRRDQRL AVTARHRPDL VEAARVAGRL
DRADEAVLAK LNGLL
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