Gene Aave_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1877 
Symbol 
ID4666603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2035896 
End bp2036678 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID639823086 
ProductABC transporter-related protein 
Protein accessionYP_970235 
Protein GI120610557 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CAACCAACGA AGTGGTGCTG CAGGTCGCCG GTATTTCCAA GCGCTTCGGC 
GGGCTGCAGG CCCTCTCCGA CGTGGGCATC ACCATCGGCC GTGGCCAGGT CTACGGCCTC
ATCGGCCCGA ATGGCGCAGG CAAGACCACC TTCTTCAACG TCATCACGGG CCTCTACACG
CCCGACAGCG GCACCTTCCA GCTGGCCGGC AAGTCCTATG AGCCCACGGC GGTGCACGAG
GTCGCCAAGG CGGGCATCGC GCGCACGTTC CAGAACATCC GGCTCTTCGC CGAGATGACG
GCGCTCGAGA ACGTGATGGT GGGCCGGCAC ATCCGCACGC AGTCCGGCCT GATCGGCGCG
ATCTTCCGCA CCAAGGCCTT CAAGGAAGAA GAGGCCGCGA TCGCCAGGCG CGCGCAGGAA
CTGCTCGACT ACGTTGGCAT CGGCAAATAC GCCGATTTCA AGGCACGCAC CCTGTCCTAC
GGCGACCAGC GCCGCCTGGA GATCGCGCGC GCCCTGGCCA CCGATCCGCA ATTGATCGCG
CTCGACGAGC CGGCCGCCGG CATGAACGCC ACCGAGAAGG TGCAGTTGCG CGAACTGATC
GACCGCATCC GCCGCGACAA CCGCACCATC CTGCTCATCG AGCACGACGT GAAGCTGGTG
ATGGGCCTGT GCGACCGCGT GACCGTGCTC GACTACGGCA AGCAGATCGC CGAAGGAACC
CCTGCCGACG TGCAGAAGAA CGAAAAAGTG ATTGAGGCCT ACCTGGGCAC CGGAGGACAC
TGA
 
Protein sequence
MAETTNEVVL QVAGISKRFG GLQALSDVGI TIGRGQVYGL IGPNGAGKTT FFNVITGLYT 
PDSGTFQLAG KSYEPTAVHE VAKAGIARTF QNIRLFAEMT ALENVMVGRH IRTQSGLIGA
IFRTKAFKEE EAAIARRAQE LLDYVGIGKY ADFKARTLSY GDQRRLEIAR ALATDPQLIA
LDEPAAGMNA TEKVQLRELI DRIRRDNRTI LLIEHDVKLV MGLCDRVTVL DYGKQIAEGT
PADVQKNEKV IEAYLGTGGH