Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1877 |
Symbol | |
ID | 4666603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2035896 |
End bp | 2036678 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639823086 |
Product | ABC transporter-related protein |
Protein accession | YP_970235 |
Protein GI | 120610557 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.271075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA CAACCAACGA AGTGGTGCTG CAGGTCGCCG GTATTTCCAA GCGCTTCGGC GGGCTGCAGG CCCTCTCCGA CGTGGGCATC ACCATCGGCC GTGGCCAGGT CTACGGCCTC ATCGGCCCGA ATGGCGCAGG CAAGACCACC TTCTTCAACG TCATCACGGG CCTCTACACG CCCGACAGCG GCACCTTCCA GCTGGCCGGC AAGTCCTATG AGCCCACGGC GGTGCACGAG GTCGCCAAGG CGGGCATCGC GCGCACGTTC CAGAACATCC GGCTCTTCGC CGAGATGACG GCGCTCGAGA ACGTGATGGT GGGCCGGCAC ATCCGCACGC AGTCCGGCCT GATCGGCGCG ATCTTCCGCA CCAAGGCCTT CAAGGAAGAA GAGGCCGCGA TCGCCAGGCG CGCGCAGGAA CTGCTCGACT ACGTTGGCAT CGGCAAATAC GCCGATTTCA AGGCACGCAC CCTGTCCTAC GGCGACCAGC GCCGCCTGGA GATCGCGCGC GCCCTGGCCA CCGATCCGCA ATTGATCGCG CTCGACGAGC CGGCCGCCGG CATGAACGCC ACCGAGAAGG TGCAGTTGCG CGAACTGATC GACCGCATCC GCCGCGACAA CCGCACCATC CTGCTCATCG AGCACGACGT GAAGCTGGTG ATGGGCCTGT GCGACCGCGT GACCGTGCTC GACTACGGCA AGCAGATCGC CGAAGGAACC CCTGCCGACG TGCAGAAGAA CGAAAAAGTG ATTGAGGCCT ACCTGGGCAC CGGAGGACAC TGA
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Protein sequence | MAETTNEVVL QVAGISKRFG GLQALSDVGI TIGRGQVYGL IGPNGAGKTT FFNVITGLYT PDSGTFQLAG KSYEPTAVHE VAKAGIARTF QNIRLFAEMT ALENVMVGRH IRTQSGLIGA IFRTKAFKEE EAAIARRAQE LLDYVGIGKY ADFKARTLSY GDQRRLEIAR ALATDPQLIA LDEPAAGMNA TEKVQLRELI DRIRRDNRTI LLIEHDVKLV MGLCDRVTVL DYGKQIAEGT PADVQKNEKV IEAYLGTGGH
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