Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1838 |
Symbol | |
ID | 4665691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1992040 |
End bp | 1992822 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639823040 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_970196 |
Protein GI | 120610518 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.525329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG GGCCGACCTT CATCCAGTCG CGCGACAACG CATTCGTGAA GGACCTGCGG CGGCTGGCGC AGGACAGCGG CGCCTACCGC CGCCAGGGCC GCGTCTGGCT CGAGGGCGAC CACCTCTGCC GTGCCGCACT GGAGCGCGGC GTGCAGCCGG CCATCGGCGT CTATGCCGAA TCCGCCTGGC CGGAGTGGGA GCGCGAATGG GGAGCGGCCG CCGCACGCAA CGTGGTGCTG GCCGATGCGC TCTGGGCCGA CGTGAGCGGG CTGGAATCGC CGGCGCGCAT GGGCTTCGTG GTGCCCGTGC CCGAGGCGCC GGTGCTGCAG GCCGGCCTGC CGACCGTGGT GCTGGACCGG CTGCAGGATG CGGGCAACGT GGGGTCCATC CTGCGCAGCG CCTCGGCTTT CGGTTTCCGC CAGGTGGCGG CCCTGAAAGG CACGGCGGGC CTCTGGAGCC CCAAGGTGCT GCGGGCCGGC ATGGGCGCGC ATTTCGCGCT GCACCTGGTG GAGGGGCTGG CGGTGGACGA CATCGACGCG CTGGCCCTGC CGCTGCTGGC CACGAGTTCG CACGGCGGCG ACCTGCTGCA CCGCGCGCGC CTGCCCTGGC CCTGCGGCTG GATCCTGGGC CACGAGGGGC AGGGCGTTTC CGAGGCGCTG CAGCAGCGCG CCACGCACCT GATCCGTATC GCGCAGCCGG GCGGCGAGGA ATCGCTCAAC GTGGGGGCGG CGGCGGCCAT CTGCCTGCAC GCGAGCGCGG CGCACGCGGA TTCCTCAGAG TAA
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Protein sequence | MTAGPTFIQS RDNAFVKDLR RLAQDSGAYR RQGRVWLEGD HLCRAALERG VQPAIGVYAE SAWPEWEREW GAAAARNVVL ADALWADVSG LESPARMGFV VPVPEAPVLQ AGLPTVVLDR LQDAGNVGSI LRSASAFGFR QVAALKGTAG LWSPKVLRAG MGAHFALHLV EGLAVDDIDA LALPLLATSS HGGDLLHRAR LPWPCGWILG HEGQGVSEAL QQRATHLIRI AQPGGEESLN VGAAAAICLH ASAAHADSSE
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