Gene Aave_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1837 
SymbolrnhB 
ID4665935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1991321 
End bp1992043 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID639823039 
Productribonuclease HII 
Protein accessionYP_970195 
Protein GI120610517 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCA GAAAATCCTT GCCGCGCGTT GAGCAGGCCC ATCTGCCATG GCATCCGCCG 
GGACTCGTCG CGGGCGTGGA CGAGGCGGGC CGCGGGCCGC TGGCCGGGCC CGTGGTGGCC
GCGGCCGTCA TCCTCGACGA ATTGCAGCCC ATCGAGGGCC TGGCGGACTC CAAGACACTC
ACCGCGGCCC GCCGCGAGGC GCTGTTCGAC GAAATCCGCG CCAAGGCGCT GTGCTGCAGC
GTCGCCGAGG CCACGGTGGA AGAGATCGAC ACGCTGAACA TCCTGCAGGC CACCATGCTG
GCGATGCGCC GCGCCGTGGC CGGCCTGCGC CTCAAGCCGG TGCGCGTGCT CGTGGACGGC
AACCGCCTGC CGCCGCTGGA CGTGCCCGCC GAGGCCATCG TCAAGGGCGA CGCGCTGGTG
CAGGCCATCT CCGCCGCATC CATCCTGGCC AAGGTCACGC GCGACCGCTG GTGCGCGCAA
CTGCACGAGG CCTACCCGCA CTACGGCTTC GCCTCGCACA AGGGCTATGG CACGGCGGAG
CACATGGCGG CCCTGCAGGC CCATGGCGCA TGCCCGGAAC ACCGTCGCTC CTTCGCACCG
GTCGCTGCGG CGGTGCAGCG CACCGTGGTC ATGCAGGCCA CCGCCACCAT CGTGACGACC
GTGGAAACCA CCGTCTCCGT ACGCCCCGCG GCGCCCCGGG CCGCGGAAGG GCTGCACGCA
TGA
 
Protein sequence
MRSRKSLPRV EQAHLPWHPP GLVAGVDEAG RGPLAGPVVA AAVILDELQP IEGLADSKTL 
TAARREALFD EIRAKALCCS VAEATVEEID TLNILQATML AMRRAVAGLR LKPVRVLVDG
NRLPPLDVPA EAIVKGDALV QAISAASILA KVTRDRWCAQ LHEAYPHYGF ASHKGYGTAE
HMAALQAHGA CPEHRRSFAP VAAAVQRTVV MQATATIVTT VETTVSVRPA APRAAEGLHA