Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1837 |
Symbol | rnhB |
ID | 4665935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1991321 |
End bp | 1992043 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823039 |
Product | ribonuclease HII |
Protein accession | YP_970195 |
Protein GI | 120610517 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCCA GAAAATCCTT GCCGCGCGTT GAGCAGGCCC ATCTGCCATG GCATCCGCCG GGACTCGTCG CGGGCGTGGA CGAGGCGGGC CGCGGGCCGC TGGCCGGGCC CGTGGTGGCC GCGGCCGTCA TCCTCGACGA ATTGCAGCCC ATCGAGGGCC TGGCGGACTC CAAGACACTC ACCGCGGCCC GCCGCGAGGC GCTGTTCGAC GAAATCCGCG CCAAGGCGCT GTGCTGCAGC GTCGCCGAGG CCACGGTGGA AGAGATCGAC ACGCTGAACA TCCTGCAGGC CACCATGCTG GCGATGCGCC GCGCCGTGGC CGGCCTGCGC CTCAAGCCGG TGCGCGTGCT CGTGGACGGC AACCGCCTGC CGCCGCTGGA CGTGCCCGCC GAGGCCATCG TCAAGGGCGA CGCGCTGGTG CAGGCCATCT CCGCCGCATC CATCCTGGCC AAGGTCACGC GCGACCGCTG GTGCGCGCAA CTGCACGAGG CCTACCCGCA CTACGGCTTC GCCTCGCACA AGGGCTATGG CACGGCGGAG CACATGGCGG CCCTGCAGGC CCATGGCGCA TGCCCGGAAC ACCGTCGCTC CTTCGCACCG GTCGCTGCGG CGGTGCAGCG CACCGTGGTC ATGCAGGCCA CCGCCACCAT CGTGACGACC GTGGAAACCA CCGTCTCCGT ACGCCCCGCG GCGCCCCGGG CCGCGGAAGG GCTGCACGCA TGA
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Protein sequence | MRSRKSLPRV EQAHLPWHPP GLVAGVDEAG RGPLAGPVVA AAVILDELQP IEGLADSKTL TAARREALFD EIRAKALCCS VAEATVEEID TLNILQATML AMRRAVAGLR LKPVRVLVDG NRLPPLDVPA EAIVKGDALV QAISAASILA KVTRDRWCAQ LHEAYPHYGF ASHKGYGTAE HMAALQAHGA CPEHRRSFAP VAAAVQRTVV MQATATIVTT VETTVSVRPA APRAAEGLHA
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