| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1836 |
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| Symbol | lpxB |
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| ID | 4665415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1990201 |
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| End bp | 1991352 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639823038 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_970194 |
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| Protein GI | 120610516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.887238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACG CCCTTCGCAT CGCGATGGTG GCCGGCGAGA CGTCCGGCGA CCTGCTCGCC
GGCCTGCTCC TGGACGGCCT GCACGCGCAG TGGCCGGCGG TGTCCGCGCA GGGCATCGGC
GGGCCGCAGA TGGAACGCCG GGGCTTCCAT TCCCTGTGGC CGAGCGAGCG CCTCGCGGTG
CACGGCTACA GCGTCGAGCT GGTGCGCCGC CTCTGGGGCA TCGTGCGCAT CCGCCAGCAA
TTGCGCAGCC GCCTGCTCGC GGAGCGGCCC GGCCTCTTCA TCGGCATCGA TGCCCCGGAT
TTCAACCTGG GCCTGGAGGC CGACCTGCGC GCCGCGGGCA TCAGGACCGT GCATTTCGTC
TGCCCGTCCA TCTGGGCCTG GCGTGCGGAG CGGGTCCACA AGATCCGGCG CAGCGCCGAC
CATGTGCTGT GCATCTTCCC CTTCGAGCCC GAACTGCTGG CGCGCCACGG CATCGACGCG
ACCTACGTGG GCCATCCGCT GGCCCAGGTC ATTCCGATGG AGCCCGACCG CCTCGCGGCC
CGCGCGCAGC TGGGGCTGGG CGCGGACGAC GAGGTGCTGG CCATCCTGCC CGGCAGCCGC
TCCGCGGAAG TCGCCTACAT CGCCCGGCCG TTCTTCCAGG CGGCGGCGCT GCTGCGCCAA
GCGCGGCCCG GGCTGAAGAT GGTGGTGCCG GCGGTACCGG CGCTGCGCGC GCGCATCGAG
CAGATCGCCG CCGAGTGCGG AGTGCGCGAT GCGTTGCTGA TAACGCCCGG GCAATCCCAC
ACGGTGCTGG CCGCCTGCGA CTGCACGCTC ATCGCCAGCG GGACCGCGAC GCTGGAGGCC
GCGCTGTTCA AGCGGCCCAT GGTCATCGCC TACCACATGC ACCCCATCAG CTGGCGCCTG
ATGTGCCGCA AGCAGCTGCA GCCCTGGGTG GGGCTGCCCA ACATCCTGTG CGGCGATTTC
GTGGTGCCCG AACTGCTGCA GGACGCGGCC ACGCCGCAGG CCCTGGCCAC GGCCGTGATG
CAGTGGCTGG ACGCACCAGC CGGCCAGCGC GACGCGCTGG CGCGGCGCTT CACCGCGCTG
CACGAGGAAC TGCGCCGCGA TACCCCGAGA TTGGCCGCCG ATGCGATCCA GAAAATCCTT
GCCGCGCGTT GA
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| Protein sequence | MQDALRIAMV AGETSGDLLA GLLLDGLHAQ WPAVSAQGIG GPQMERRGFH SLWPSERLAV
HGYSVELVRR LWGIVRIRQQ LRSRLLAERP GLFIGIDAPD FNLGLEADLR AAGIRTVHFV
CPSIWAWRAE RVHKIRRSAD HVLCIFPFEP ELLARHGIDA TYVGHPLAQV IPMEPDRLAA
RAQLGLGADD EVLAILPGSR SAEVAYIARP FFQAAALLRQ ARPGLKMVVP AVPALRARIE
QIAAECGVRD ALLITPGQSH TVLAACDCTL IASGTATLEA ALFKRPMVIA YHMHPISWRL
MCRKQLQPWV GLPNILCGDF VVPELLQDAA TPQALATAVM QWLDAPAGQR DALARRFTAL
HEELRRDTPR LAADAIQKIL AAR
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