| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1833 |
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| Symbol | lpxD |
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| ID | 4665538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1987937 |
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| End bp | 1988938 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823035 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_970191 |
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| Protein GI | 120610513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.54401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTGC GTCTCAGGCA GATTGTTGAG GCGCTGGGCG GAACGATCGA AGGAGGCGGC
GGCGACGTCG AGATTCTTCG CATCGCCCCG CTCGAATCGG CGGAGCCGGG CGACCTGGCC
TTCCTGAGCA ATCCGCGCTA CCGCCAACAA CTGGCCGCCT CCCGGGCGGC CTGTGTCATT
GTGGCTCCCG CGATGCGCGA GGAAGCGCTG GCGCGCGGCG CGTGCATCGT GGCGGAGGAT
CCCTACGCCT ATTTCGCGCG CGCGACGCAG CTCTGGAAGC GCCTGCACGG CCGCACGCCC
GCTGCGGGCG TCCATCCGTC CGCAGTGGTG GATCCGGACG CCTTCGTCGA TCCCTCGGCG
CACATCGGCC CGCTCTGCGT GGTCGAGCGC GGCGCGCGCA TCGGCGCAGG CACGGTGCTG
ACCTCGCGCA TCACCGTGGG CGAAGGCTGC CGCATCGGCG AGCGCTGCCT GCTGCACCCG
GGCGTGGTGA TCGGCGCGGA CGGTTTCGGC TTCGCGGCCG AGGGTGGCGC CTGGACCAAG
ATCGAGCAGC TCGGCGCCGT GCGCATCGGC GACGACGTGG AGATCGGGGC CAACACCTGC
ATCGACCGCG GGGCGCTGGA CGACACCGTC ATCGAGGACG GCGTCAAGCT CGACAACCTC
GTGCAGATCG GCCACAACGT GCACATCGGG CGGCACACGG CCGTGGCCGG CTGCACCGGC
GTGTCCGGCA GCACGCGCAT CGGCGCCCGC TGCATGATCG GCGGCGCGGC GATGATCCTC
GGGCATCTGG AGATCGCCGA CGGCGTGCAG GTATCGCCCG GCACGGCCAT CACGCGCTCC
GTCCTGAAGC CGGGGCTCTA CTCCGGCATG TTTCCCTTCG ACGAGAATGC GAAGTGGGAA
AAGAACGCGG CCACGCTGCG CCAGCTCCAC GGGCTGCGCG CGCGCATCAT GGCCCTCGAA
GAACAGATAC GAAAAGACGG TCCCACCGCA CATATCCAAT GA
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| Protein sequence | MSVRLRQIVE ALGGTIEGGG GDVEILRIAP LESAEPGDLA FLSNPRYRQQ LAASRAACVI
VAPAMREEAL ARGACIVAED PYAYFARATQ LWKRLHGRTP AAGVHPSAVV DPDAFVDPSA
HIGPLCVVER GARIGAGTVL TSRITVGEGC RIGERCLLHP GVVIGADGFG FAAEGGAWTK
IEQLGAVRIG DDVEIGANTC IDRGALDDTV IEDGVKLDNL VQIGHNVHIG RHTAVAGCTG
VSGSTRIGAR CMIGGAAMIL GHLEIADGVQ VSPGTAITRS VLKPGLYSGM FPFDENAKWE
KNAATLRQLH GLRARIMALE EQIRKDGPTA HIQ
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