Gene Aave_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1828 
Symbol 
ID4665542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1981599 
End bp1982453 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content73% 
IMG OID639823030 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_970186 
Protein GI120610508 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.930496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCA CGCGCATCCT CACGGCCATC GTCCTGCTGG CCATCCTGTT GCCGGCGCTC 
TTCGCCGGCT CGGTCGTGCC TTTCGCGGCC GTGGTGCTGG TGCTCATGGC CGCCGGCGGC
TGGGAGTGGG GCCGGCTGCA GGGCCTGGGC CAGCCGGCGT CCCTGGCGGT GGGCGCGGCC
TGCGTGCTGC TCTGCGCCGC GAGCTGGGCG GGCGGCTGGA CGGAGCGTCC GCTGACCTGG
CTCTGGGCCG CCGCCGGCGC CGGCTGGGTG CTGTGCGGCG CCTGGCTGCT GCGCCATGGC
GTGGAGGGCT GGCCGCGCAT TCCCCATCCC GTGCGCCTGG CCGGCGGGGT GCTGGCCCTC
TGGCTGGCGT GGCTGGCCGC CGTGCAGGCG CGCACCATCG GCATCAATTT CCTGCTGTCC
GTGCTCGTGC TGGTCTGGGT CGCGGACATC TTCGCCTATT TCGCCGGCCG GGCGTTCGGC
CTGCGCTTCA CGCGTTCCAA GCTGGCGCCT TCCATCAGCC CCGGCAAGAG CTGGGAAGGC
GTCTGGGGCG GCATGGCCGG CGTGATCGTG CTCGCCCTGG CCTGGGCGGC GGCCGATGCC
GCCTCGCAGG CCCCGGTCCC GAGCTTCTAC TCGCGGCTGG CCGCCAAGGG CTGGTGGCTG
CTGGTCATCG GCGCGGTGTT CATGGCCTGC ATGAGCGTGG TGGGCGATCT CGTCGAATCG
CTGGTCAAGC GCAGCGCGGG CGCCAAGGAC AGCAGCCGGC TGCTGCCCGG CCACGGCGGC
GTGCTCGACC GGGTGGACGC GCTGCTGCCC ACGCTGCCCC TGGCCATGAT GCTCACCCAT
TTCGCTGCCC CATGA
 
Protein sequence
MLVTRILTAI VLLAILLPAL FAGSVVPFAA VVLVLMAAGG WEWGRLQGLG QPASLAVGAA 
CVLLCAASWA GGWTERPLTW LWAAAGAGWV LCGAWLLRHG VEGWPRIPHP VRLAGGVLAL
WLAWLAAVQA RTIGINFLLS VLVLVWVADI FAYFAGRAFG LRFTRSKLAP SISPGKSWEG
VWGGMAGVIV LALAWAAADA ASQAPVPSFY SRLAAKGWWL LVIGAVFMAC MSVVGDLVES
LVKRSAGAKD SSRLLPGHGG VLDRVDALLP TLPLAMMLTH FAAP