Gene Aave_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1816 
Symbol 
ID4666700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1970987 
End bp1971451 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content72% 
IMG OID639823018 
ProductMerR family transcriptional regulator 
Protein accessionYP_970174 
Protein GI120610496 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0245036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.855302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCG CAAGCCCCCA CCACCGTATC GGCGATGCCG CCCGCCTCTC CGGCGTGCCC 
ACCGCCAACA TCCGCTACTA CGAGAAGGAG GGGCTGCTGC CCGCGCAGGC CCGCGCCGAC
AACCGCTACC GCCTCTACAG CGACGACGAA ATCCACCGCC TGCGGTTCAT CCGCCTGTGC
CGCGCCATGG ACATGTCGCT GGACGAAGTG CGCACGCTGC TCTCGCTCGG CCGGGGCATG
GACACCGCCG CAGACCATGC GGCCTGCGCC ACCGTGGACG AGCACCTGCT GCACGTACGC
ACCCGCCTGC GGGAGCTGCA GGCGCTGGAG GCCCAGCTGC TGTCGCTGCG AGGGCGCTGC
GACGGCACCG ACGGCAGCCG CTGCCACGTG ATCGAGGCCC TCCATGACCG TGCCGATGCC
GATCCCCTGC CGCTGCCCGA TCCGCCGGCG CGCCGGCATG TGTGA
 
Protein sequence
MPAASPHHRI GDAARLSGVP TANIRYYEKE GLLPAQARAD NRYRLYSDDE IHRLRFIRLC 
RAMDMSLDEV RTLLSLGRGM DTAADHAACA TVDEHLLHVR TRLRELQALE AQLLSLRGRC
DGTDGSRCHV IEALHDRADA DPLPLPDPPA RRHV