| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1804 |
|---|
| Symbol | |
|---|
| ID | 4669529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1958502 |
|---|
| End bp | 1959554 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639823007 |
|---|
| Product | peptidase S58, DmpA |
|---|
| Protein accession | YP_970163 |
|---|
| Protein GI | 120610485 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.374201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACC GCCCCATCTC CCCCGGCTCC ATCACCCAGG TAGCAGGCAT CGAAGTCGGC
CACTTCACCT CCCCCCTCCG CCCCACCGGC TGCACCGTCG TCATCGCCCG CGAAGGCGCC
GTGGCAGGCG TGGATGTGCG CGGCGCGGCC CCCGGCACGC GCGAAACCGA TCTGCTGGAG
CCCACGCACC TGGTCGACCG CATCCATGCC GTGATGCTGG CCGGCGGCAG CGCGTTCGGG
CTGGATGCGG CGGCGGGCGC GGTGCGGTGG CTGGAGGAGC GCGGTATCGG GTTCGACGTG
GGGGTGGCGC GGGTGCCGCT GGTGCCGGCG GCGGTGCTGT TCGATCTGCA CGTGGGCGAT
GCGCGCATCC GGCCCGATGT GGCGGCGGGC TATGCGGCGT GCGAGGCGGC TGCCGCTGCA
GCTTCTTCGG GTGCGGCGGC CATGCCGCTG GCCGAGGGCT GCGTGGGCGC GGGCGCCGGA
GCAGCCGTGG GCAAGCTGTT CGGCATGGCG CATGCGATGA AGGGCGGCAT CGGCAGCGCA
TCGGTCACCG TGGATGGCGT GACGGTGGGC GCGCTGGTGG CCTGCAATGC GGTGGGCGAC
GTGGTGGACC CGGAGACGGG CCGCCCGGTG GCCGGCGCTC GCACGGCCGA TGGCCTGCAC
CTGCGCGATA CGCGCCGCGC GCTGCTGGCG GGCGATGCGC CGCGCACGCT GCTTGCGGGC
ACCAACACCA CGATCGGCGT GGTGGCGACC GATGCGGTGA TCACCAAGGC GCAGGCGCGC
CGGCTGGCGG TGTGCGCGCA CGACGGGCTG GCGCGGGCGA TCAATCCGGT GCACACGCTG
TCGGATGGCG ACACGCTGTT CGCGCTGGGC ACCGGACGGG CGGGCAAGCC GCTCGGGATG
ATGTTGCTCT CCACCATGGC GGCCGAGGCG ACGGCGCGCG CCACGCTGCG CTCGGTGCTG
GCGGCGCGCT CGCTGACCAC GGCCGAGGGG CTGCACCTGC CCTGCGCGGC CGACGTCGCC
GGCACGGCGC CCTGGGGAGC GGGCTGGCCA TGA
|
|---|
| Protein sequence | MSNRPISPGS ITQVAGIEVG HFTSPLRPTG CTVVIAREGA VAGVDVRGAA PGTRETDLLE
PTHLVDRIHA VMLAGGSAFG LDAAAGAVRW LEERGIGFDV GVARVPLVPA AVLFDLHVGD
ARIRPDVAAG YAACEAAAAA ASSGAAAMPL AEGCVGAGAG AAVGKLFGMA HAMKGGIGSA
SVTVDGVTVG ALVACNAVGD VVDPETGRPV AGARTADGLH LRDTRRALLA GDAPRTLLAG
TNTTIGVVAT DAVITKAQAR RLAVCAHDGL ARAINPVHTL SDGDTLFALG TGRAGKPLGM
MLLSTMAAEA TARATLRSVL AARSLTTAEG LHLPCAADVA GTAPWGAGWP
|
|---|
| |