Gene Aave_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1788 
Symbol 
ID4669271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1942311 
End bp1942685 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content67% 
IMG OID639822990 
Producthypothetical protein 
Protein accessionYP_970147 
Protein GI120610469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.611433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAG TGAATGCATT GCCCGGCGGC TGGTGGACGG TCGTTGGCGG CACGCTTGGG 
ACCATCGCGG CAGCCGGGAT GTACCTGCGC CAGTACCTGA GCGGCGCAGC AGCGCAGCGG
GCCAGCGACG CCGGCCAGAT CACCGCGCTC GGCGTCTATC AGAAGCTGCT CGAAGACGCG
ATCAAGCGCG CCGCCGACGC CGAGACGCGC GCCGATGGGT TCGCGAAGGA GCGGAACGAA
GCGCTGCAGA ACCTCGGACG GATGGAGGGG CGCCTGGCAG CCGTCCAGCA GCAACTCGAA
GAGGCGCTGG CCCGAATCGC TGAACTGACC ACCCAGGTCA CCCAACTGCG GGAGCAAGTC
GATGCGAAAA CCTGA
 
Protein sequence
MPEVNALPGG WWTVVGGTLG TIAAAGMYLR QYLSGAAAQR ASDAGQITAL GVYQKLLEDA 
IKRAADAETR ADGFAKERNE ALQNLGRMEG RLAAVQQQLE EALARIAELT TQVTQLREQV
DAKT