Gene Aave_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1768 
Symbol 
ID4667233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1923127 
End bp1924638 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content66% 
IMG OID639822972 
Productphage terminase 
Protein accessionYP_970129 
Protein GI120610451 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGAA GCCGAAGTAG GGGGCTGCGG AACATCGCCT GGATCGAGTC GATGTGCCGT 
ATCCCCGACG GCAAGCATGT TGGGCAGCCG GTGCGGCTGA CCAAGCCTCA GAAGGAGTGG
ATCCGGAAGA TCTATGACAC GCCGACGCGC ACGTTCATCC TGAGCATGGC GCGCAAGAAC
GCGAAGACGG CCACGAGCGC ATTCCTGCTG CTCCTGCACC TGTGCGGGCC CGAGGCCAAG
CCGAACAGCC AGCTGTACAG CGCAGCACAG TCCCGCGACC AGGCGGCTAT CCTCTACGGA
TACGCCTCCA AGGTCGTGCG CATGTCGCCG GAACTGAGCG AGTACGTCAT CCCGAAGGAG
TCGGCGAAGA CCCTGGTCTG CCCCGAGCTT GGCACCACCT ACCGCGCGCT GTCTGCGGAC
GCCTCGACGG CCTACGGGCT CTCGCCGGTG TTCTCGGTGC ACGACGAACT GGGGCAGGTG
GTCGGGCCGC GGTCGGAACT GTACGAGGCG ATCGAAACGG CATCGGCCGC GCATGAGCGG
CCGCTGTCGA TCATCATCAG TACGCAGGCG CGCACGGATG CCGACCTGCT GAGCCTGCTG
ATCGACGACG CGCTGACGGG TGCGGACCCG CGGGTGAAAG TGGCGCTGCA CACCGCGCCC
ATGGACATGG ACCCGTTCAG CGACAAGGCG ATCCGGGCGG CGAACCCGCA CTTCGACGTG
TTCATGAACC AGGAGGAGGT CCGCAAGCAG GCTACGGACG CCAAGCGGCT GCCGAGCATG
GAGGCGGGCT ACCGCAACCT GATCCTCAAC CAGCGGGTGG AGGCGAAGAC GCCCTTCATC
ACGCGGGCGG TGTGGCAGGA AAACGGGGCC GAGCCGGACG ACCAGCCAGG CCTGAAGGTG
TACGGGGGGC TCGACCTGTC GGCCGTGAGC GACCTGACGG CGTTGGTGCT GGCCTCCGAT
GTCGGCGACG TGATCCCGAG CTTCTGGCTG CCGGGCGACG GGCTCGCGGA GAAGTCCCGA
GCGGACCGCG TGCCCTACGA CGTTTGGGCA TCCAAAGGAC TGCTCAAGAC GACCCCGGGC
CGGTCAATCG AGTACGAGTA CGTGGCCGCC GAGCTGCGCG CCGTTTTCGA TCGGTACGAC
GTCCAGGCGA TCGCTTTCGA CCGCTGGGGC ATGCGGCACC TACGGCCATG GCTGGTGAAG
GCCGGGTTCA CCGAGAAGGA GCTGGCGAAG TTCGTGGACT TCGGCCAGGG ATTTCAGTCG
ATGTCGCCGG CCATCCGGAC GCTCGAGGAA AAGCTGCTGG CCAAGAAGCT GAAGCACGCC
AACCACCCCG TGCTGTCGAT GTGCGCGGCC AATGCGATCG TGGTCAAGGA CCCGGCCGAG
AACCGCAAGT TCACCAAGTC CAAGGCGAGC GGCCGGATCG ACGGCATGCA GGCCCTGGCC
ATGGCCGTCG GGGTGATGCC GATGGCAGAG CCACCGAAGC CGCCACCGAA GTACCAGATG
TTCGTCGTCT GA
 
Protein sequence
MTRSRSRGLR NIAWIESMCR IPDGKHVGQP VRLTKPQKEW IRKIYDTPTR TFILSMARKN 
AKTATSAFLL LLHLCGPEAK PNSQLYSAAQ SRDQAAILYG YASKVVRMSP ELSEYVIPKE
SAKTLVCPEL GTTYRALSAD ASTAYGLSPV FSVHDELGQV VGPRSELYEA IETASAAHER
PLSIIISTQA RTDADLLSLL IDDALTGADP RVKVALHTAP MDMDPFSDKA IRAANPHFDV
FMNQEEVRKQ ATDAKRLPSM EAGYRNLILN QRVEAKTPFI TRAVWQENGA EPDDQPGLKV
YGGLDLSAVS DLTALVLASD VGDVIPSFWL PGDGLAEKSR ADRVPYDVWA SKGLLKTTPG
RSIEYEYVAA ELRAVFDRYD VQAIAFDRWG MRHLRPWLVK AGFTEKELAK FVDFGQGFQS
MSPAIRTLEE KLLAKKLKHA NHPVLSMCAA NAIVVKDPAE NRKFTKSKAS GRIDGMQALA
MAVGVMPMAE PPKPPPKYQM FVV