Gene Aave_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1725 
Symbol 
ID4665215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1890234 
End bp1891067 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID639822927 
Producthypothetical protein 
Protein accessionYP_970086 
Protein GI120610408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.901985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0022695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTAC GGCGGCCTCT GGTCAGGGTG GGCGGGCGCG TCCGGCAGTT GCCTGCCGGT 
GACACGCTCC AAGACGTGCG CGAGAGGCTG TCGGCCGCGC GGACCTACTA CGTCCGCACC
GATGGAAGCG ACAGCAACAC CGGGTTGGTG AACACCAGTG CTGGCGCTTT CCTGACCATT
CAAAAGGCCA TTAACGTAGT TTCCAGTCTT GATTGCGGAA ACAACGACGT CACGATTTCA
ATCGGCAGCG GGGCTTTCGC GCCTTTTGAA ACACGAGATC CGATCGGATC AGGCGCGGTC
GCCATCGTGG GCGCGGGCGC CGCCGCGACG AGCATTAGTA CCGCAAGCGG GTCATGTATC
AATGTTCCAG CCGGGTCCAG GAAGTACACC ATATCAGGAA TCAAGCTGAG CAGTTCCGAT
AGCACGTTCG GCGGAAATGC AATATCTGTG GATATTGGAA GTCAGCTGTC AGCCGGGGAT
ATTGATTTCG GCGCTTGCGG CAATTTTCAT GTTAATTGCT CAGGGACAAT TATACTGCGG
GGATACAAAA TCAGCGGATC CGCACGGGTG CATTGGTATG CCTCCAACGG TGCGAAAATT
ATTTGCGCAG GTTGGACCAT CACGCTAGCC GGAACGCCGA ACTTTTCCAC ATCTTTTGCT
TATGCCGATT GCCTGTCGCT TCTGCGAGTT AATGAAAATA CCTACAGCGG AACAGCTACG
GGAGTCCAAT ACAACGTCTT CGCGAATTCT GCGATTTTCG TGAACGGTGC GGGGGAAAGC
TATTTGCCCG GTAATTCTGT GGGCTCGAAA TTTACAGGCG GGCAGTACGC ATGA
 
Protein sequence
MAVRRPLVRV GGRVRQLPAG DTLQDVRERL SAARTYYVRT DGSDSNTGLV NTSAGAFLTI 
QKAINVVSSL DCGNNDVTIS IGSGAFAPFE TRDPIGSGAV AIVGAGAAAT SISTASGSCI
NVPAGSRKYT ISGIKLSSSD STFGGNAISV DIGSQLSAGD IDFGACGNFH VNCSGTIILR
GYKISGSARV HWYASNGAKI ICAGWTITLA GTPNFSTSFA YADCLSLLRV NENTYSGTAT
GVQYNVFANS AIFVNGAGES YLPGNSVGSK FTGGQYA