| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1667 |
|---|
| Symbol | |
|---|
| ID | 4665589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1828755 |
|---|
| End bp | 1829873 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639822869 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_970028 |
|---|
| Protein GI | 120610350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA AGAGAAAACG GGGCAACTCG TGGGAATACA TCTTCAAGCG GGCCGGCGTG
CTGGAGAAGC CGCTGTACCT GAGCTTCGAT GATGAGGAGG AGGGAGACCG GTACGCGGCC
AGGCTCGACG CCCTGCTGGA ACGGGGAATC GTACCCACCG AGCTGCGCAC GCCAGATCGG
CCCATGACCA TCCAGCAGCT GGTGGGGCTT TTCATCCGGG ATGCGCACCC GTCGAAGAAG
GACATCGGCG CCCTGAACAC CATCGTGGCG TCCCGCGGCG GTGCCCCTCT CACGAAGATC
GATTCCGGCT GGGTGGACGA CTGGATCTCG GAAATGAAGC GGGTCGACAA GCTCGCGCCG
GCTTCGATCC GGGCCAAGGT GGGGGCGCTC GCGCGGTGCT GCGACTGGGG CATGCGCAAG
GGCTTCCTGG TCATGCCGGA CCACCCGCTG CGCACGCTCC CCGAGGGCTA CGCCCAGTAC
ACCAAGGCGG ACGAGGCGAT CGCCGGCGTG AGGCGCGAGG ACGTGGAGCG CGATCGACGG
CTGGAGGAGG GCGAGTTCGA GCAGGCGCTT GCCGTGTTGG CCGGCGGGGT GCTGGCGCGC
AAGCAGCGGC CGCTGGTGCT GGAGCACCCC CGGGCACTGC GCTGCCTGAT GATCCTGGCC
GTGGAATCGG CCATGCGACT GCGGGAAATG TTCACCCTGC ACCTGGCCCA GCTGGACCTA
CCGCGGCGCA CGGTGTTCTT GGACAAGACG AAAAATGGGG ACAAGAGGCA GGTGCCGCTG
TCGTCGGTCG CGCTGGCCGA GCTGCGGAGC TACCTGGATG ATGTGCACGG GCCCTCCCCT
GAGCCCGGCA CGCGGTTGTT CCCCTGGTGG AATGGGGAAG CGAATGATCT GGACGCGACG
AGCGACTACC TGAGCAAGCT GTTCATCGAC ATCTTTTCCC AGGCCGGTGC CCAGGGGCTG
AAATTCCATG ATCTGCGGCA CGAGGCCACG AGCCGGCTGT TCGAGCGCAC GCAGCTCTCG
GACACGCAGA TCATGAAAAT CACCGGGCAC AAGAGCCAGC GGATGCTGAT GCGCTACGCG
AACCTCCGCG CTTCCGACCT GTCGAAGGCG CTCTGGTAG
|
|---|
| Protein sequence | MAGKRKRGNS WEYIFKRAGV LEKPLYLSFD DEEEGDRYAA RLDALLERGI VPTELRTPDR
PMTIQQLVGL FIRDAHPSKK DIGALNTIVA SRGGAPLTKI DSGWVDDWIS EMKRVDKLAP
ASIRAKVGAL ARCCDWGMRK GFLVMPDHPL RTLPEGYAQY TKADEAIAGV RREDVERDRR
LEEGEFEQAL AVLAGGVLAR KQRPLVLEHP RALRCLMILA VESAMRLREM FTLHLAQLDL
PRRTVFLDKT KNGDKRQVPL SSVALAELRS YLDDVHGPSP EPGTRLFPWW NGEANDLDAT
SDYLSKLFID IFSQAGAQGL KFHDLRHEAT SRLFERTQLS DTQIMKITGH KSQRMLMRYA
NLRASDLSKA LW
|
|---|
| |