Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1658 |
Symbol | |
ID | 4665441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1818677 |
End bp | 1820227 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639822859 |
Product | extracellular solute-binding protein |
Protein accession | YP_970019 |
Protein GI | 120610341 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.710594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA CCCCCGCTTC CCGCCGCGTC GCCGCCAGCC TGCTGGCGCT GGCCGCCCTG TCCGGCACCG GCTCGGCGCT CGCCGCCGGC AATGCCGTGC TGGCCATCTA CCAGCAGCCC GAGACGCTGG ACCCCTACAA CACGAACACG ACCATCACCA CGGCCGTCAC CAAGAGCTTC TACGAAGGCC TGTTCGCGTT CGACAAGGAC ATGAAGCTCA AGAACGTGCT GGCCGAGAGC TATGAGGTTT CCAAGGACGG CCTGGTCTAT ACCTTCAAGC TGCGTTCGGG CGTGAAGTTC CACGACGGCA CCGACTTCAA CGCCGCCGCG GCCAAGGCCA ACCTGGACCG CGTGATGGAC CCGGCCAACC GCCTGCTGCG CGCCAACCAG TTCAACCGGG TGGCCAAGGT CGAGGCCGTG AATCCGCAGA CCCTGCGCAT CACGCTCAAG GAGCCCTTCG GCCCCTTCAT CAACGCGCTG GGCCATGCCT CGGCCGCGAT GATCTCGCCC GCGGCGCTCG CCAAGTGGGG CAGCAAGGAC ATCGCCTTCC ACCCCGTGGG CACCGGCCCG TTCGAGTTCG TCGAGTGGAA GCAGACCGAA GCCATCGTGG GCAAGAAGTT CGCCAACTAC TGGAAGAAGG GCTATCCCAA GGTGGACCAG GTGACCTGGA AGCCCGTCAC CGAGAACAAC ACCCGCGCCG CCATGCTGCA GACGGGCGAG GCCGACTTCG CCTTCACGCT GCCCTATGAG CAGATCGCCA CGCTGAAGAA GAGCGACAAG GTGGAAGTGG TGACCGCGCC CTCCATCATC CAGCGCTTCC TGACGTTCAA CATGCTGCAG AAGCCCTTCG ACAACCCGAA GGTGCGCGAG GCCATCGGCT ACGCCATCAA CAAGGAGGCG CTGTCCAAGG TGGCCTTCAA CGGCTACGCC TTCCCGGCCC AGGGCTTCGT GCCCCAGGGC GTGGAATACG CCGTGAAGAT GCAGCCGATT CCCTACAACG TGGCCAAGGC CAGGGAACTG CTGAAGGAAG CCGGCTACCC CAACGGTTTC GAGACCGTGC TGTGGAGCGG CTACAACAAC ACCACCAGCC AGAAGGTGAT CCAGTTCCTG CAGCAGCAGC TGCAGCAGGT GGGCATCAAG GTGTCGGTGG AGGCGCTGGA GCCCGGCAAG CGCGCCGAAA CAGTCGATGC CTGGCCCGAT CCCAAGACCT CCAAGCTGCG CCTGTACTAC ATCGGCTGGT CGTCCTCCAC CGGCGAGGCC GACTGGGCGC TGCGTCCGCT GTTCTCCACC GAATCGTGGG CGCCCAAGCT CGCGAACTAC GCCTTCTACA GCAACCAGGT GGTGGATGAC GCCATCGCCA AGGCGCTGTT GAGCACCGAC AGCTCCGAGC GTGCCGCGCT CTACAAGACC GCGCAGGAGC AGCTCGCCAA GGACCTGCCG CGCATTCCGC TGGTCACCGA GGAAGTGCTC TACGCCCACG CCAAGCGCCT CTCGGGCGTG TACGTGATGC CCGACGGCAA CATCAACAGC GAAGAAATCT CGCTGAAGTA A
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Protein sequence | MKKTPASRRV AASLLALAAL SGTGSALAAG NAVLAIYQQP ETLDPYNTNT TITTAVTKSF YEGLFAFDKD MKLKNVLAES YEVSKDGLVY TFKLRSGVKF HDGTDFNAAA AKANLDRVMD PANRLLRANQ FNRVAKVEAV NPQTLRITLK EPFGPFINAL GHASAAMISP AALAKWGSKD IAFHPVGTGP FEFVEWKQTE AIVGKKFANY WKKGYPKVDQ VTWKPVTENN TRAAMLQTGE ADFAFTLPYE QIATLKKSDK VEVVTAPSII QRFLTFNMLQ KPFDNPKVRE AIGYAINKEA LSKVAFNGYA FPAQGFVPQG VEYAVKMQPI PYNVAKAREL LKEAGYPNGF ETVLWSGYNN TTSQKVIQFL QQQLQQVGIK VSVEALEPGK RAETVDAWPD PKTSKLRLYY IGWSSSTGEA DWALRPLFST ESWAPKLANY AFYSNQVVDD AIAKALLSTD SSERAALYKT AQEQLAKDLP RIPLVTEEVL YAHAKRLSGV YVMPDGNINS EEISLK
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