Gene Aave_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1658 
Symbol 
ID4665441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1818677 
End bp1820227 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content64% 
IMG OID639822859 
Productextracellular solute-binding protein 
Protein accessionYP_970019 
Protein GI120610341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.710594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CCCCCGCTTC CCGCCGCGTC GCCGCCAGCC TGCTGGCGCT GGCCGCCCTG 
TCCGGCACCG GCTCGGCGCT CGCCGCCGGC AATGCCGTGC TGGCCATCTA CCAGCAGCCC
GAGACGCTGG ACCCCTACAA CACGAACACG ACCATCACCA CGGCCGTCAC CAAGAGCTTC
TACGAAGGCC TGTTCGCGTT CGACAAGGAC ATGAAGCTCA AGAACGTGCT GGCCGAGAGC
TATGAGGTTT CCAAGGACGG CCTGGTCTAT ACCTTCAAGC TGCGTTCGGG CGTGAAGTTC
CACGACGGCA CCGACTTCAA CGCCGCCGCG GCCAAGGCCA ACCTGGACCG CGTGATGGAC
CCGGCCAACC GCCTGCTGCG CGCCAACCAG TTCAACCGGG TGGCCAAGGT CGAGGCCGTG
AATCCGCAGA CCCTGCGCAT CACGCTCAAG GAGCCCTTCG GCCCCTTCAT CAACGCGCTG
GGCCATGCCT CGGCCGCGAT GATCTCGCCC GCGGCGCTCG CCAAGTGGGG CAGCAAGGAC
ATCGCCTTCC ACCCCGTGGG CACCGGCCCG TTCGAGTTCG TCGAGTGGAA GCAGACCGAA
GCCATCGTGG GCAAGAAGTT CGCCAACTAC TGGAAGAAGG GCTATCCCAA GGTGGACCAG
GTGACCTGGA AGCCCGTCAC CGAGAACAAC ACCCGCGCCG CCATGCTGCA GACGGGCGAG
GCCGACTTCG CCTTCACGCT GCCCTATGAG CAGATCGCCA CGCTGAAGAA GAGCGACAAG
GTGGAAGTGG TGACCGCGCC CTCCATCATC CAGCGCTTCC TGACGTTCAA CATGCTGCAG
AAGCCCTTCG ACAACCCGAA GGTGCGCGAG GCCATCGGCT ACGCCATCAA CAAGGAGGCG
CTGTCCAAGG TGGCCTTCAA CGGCTACGCC TTCCCGGCCC AGGGCTTCGT GCCCCAGGGC
GTGGAATACG CCGTGAAGAT GCAGCCGATT CCCTACAACG TGGCCAAGGC CAGGGAACTG
CTGAAGGAAG CCGGCTACCC CAACGGTTTC GAGACCGTGC TGTGGAGCGG CTACAACAAC
ACCACCAGCC AGAAGGTGAT CCAGTTCCTG CAGCAGCAGC TGCAGCAGGT GGGCATCAAG
GTGTCGGTGG AGGCGCTGGA GCCCGGCAAG CGCGCCGAAA CAGTCGATGC CTGGCCCGAT
CCCAAGACCT CCAAGCTGCG CCTGTACTAC ATCGGCTGGT CGTCCTCCAC CGGCGAGGCC
GACTGGGCGC TGCGTCCGCT GTTCTCCACC GAATCGTGGG CGCCCAAGCT CGCGAACTAC
GCCTTCTACA GCAACCAGGT GGTGGATGAC GCCATCGCCA AGGCGCTGTT GAGCACCGAC
AGCTCCGAGC GTGCCGCGCT CTACAAGACC GCGCAGGAGC AGCTCGCCAA GGACCTGCCG
CGCATTCCGC TGGTCACCGA GGAAGTGCTC TACGCCCACG CCAAGCGCCT CTCGGGCGTG
TACGTGATGC CCGACGGCAA CATCAACAGC GAAGAAATCT CGCTGAAGTA A
 
Protein sequence
MKKTPASRRV AASLLALAAL SGTGSALAAG NAVLAIYQQP ETLDPYNTNT TITTAVTKSF 
YEGLFAFDKD MKLKNVLAES YEVSKDGLVY TFKLRSGVKF HDGTDFNAAA AKANLDRVMD
PANRLLRANQ FNRVAKVEAV NPQTLRITLK EPFGPFINAL GHASAAMISP AALAKWGSKD
IAFHPVGTGP FEFVEWKQTE AIVGKKFANY WKKGYPKVDQ VTWKPVTENN TRAAMLQTGE
ADFAFTLPYE QIATLKKSDK VEVVTAPSII QRFLTFNMLQ KPFDNPKVRE AIGYAINKEA
LSKVAFNGYA FPAQGFVPQG VEYAVKMQPI PYNVAKAREL LKEAGYPNGF ETVLWSGYNN
TTSQKVIQFL QQQLQQVGIK VSVEALEPGK RAETVDAWPD PKTSKLRLYY IGWSSSTGEA
DWALRPLFST ESWAPKLANY AFYSNQVVDD AIAKALLSTD SSERAALYKT AQEQLAKDLP
RIPLVTEEVL YAHAKRLSGV YVMPDGNINS EEISLK