Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1657 |
Symbol | |
ID | 4669124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1816733 |
End bp | 1818628 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639822858 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_970018 |
Protein GI | 120610340 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCA ACGCCTCGAC CGCCTCCACG ACCCTCGCCC TGCCCGAGCA GCGCGTGCTG GCCGTGGACG ACCTCACCAT CCGCTTCGCC AATTCCGAGC GCACGGTGGA TGCCGTGCGC AACCTCTCCT TTCATGTGGA CCGCGGCGAG ACCCTGGCCA TCGTGGGCGA ATCGGGTTCG GGCAAGTCCG TCACCTCGCT GGCGCTCATG CGGCTCGTGG AGCACGGCGG CGGCAGGATC ATCGGCGGTT CGGTGGCGCT GCGCCGCCGC AATGGCCAGG TGCTGGACGT GGCCCGTGCG AGCAACGCCG TGATGCGCGA CGTGCGCGGC GCCGACGTGG CCATGATCTT CCAGGAGCCG ATGACCTCGC TCAACCCGGT GTTCACCGCG GGCGACCAGA TCGCAGAATC CATCCGCGTG CACCAGGGCA AGGACCGCGC CGCCGCGCGC GCCGAGGCGC TGCGCATGCT GGAACTGGTG CGCATTCCCG AGGCGCGCAA CGTGCTGGAC CGCTTCCCCC ACCAGCTCTC GGGCGGCATG CGCCAGCGCG TGATGATCGC CATGGCGCTG TCGTGCAAGC CGCAGCTGCT GATCGCCGAC GAGCCCACCA CGGCGCTGGA CGTGACCATC CAGGCGCAGA TCCTGCAGCT CATCCGGCAA CTGCAGGACG AGATGCACAT GGGCGTGATC TTCATCACCC ACGACATGGG CGTGGTGGCC GAGGTGGCCG ACCGCGTGCT GGTGATGTAC CGCGGCGACA AGGTGGAGGA GGGCCCGTCG GAACGCGTCT TCGCCGCACC GCGGCATGCC TACACCCGCG CGCTGCTGTC GGCCGTGCCC AAGCTGGGTG CCATGCAGGG CACCGATCTG CCGCGCCACT TCGACCTGAT CGGCGCCGAC GGCGCGCAGG ATACGCAGCC GGTGCTGGAA TCCACACCCG CCGACACCCG TCCCGCAGGC GCACAGCCCA TCCTGCGCGT GAAGGATCTG GTGACGCGCT TCGACCTGCG CGCAGGCCTG TTCAACCGCG TGAAGCGCCG CGTGCATGCG GTGGAGCGCG TGAGCTTCGA TCTCTATCCC GGCGAGACGC TGGCGCTGGT GGGCGAGTCC GGCTGCGGCA AGTCCACCAC CGGCCGCTCG CTGCTGCGCC TGGTGGAAAG CCAGAGCGGC GCCATCGAAT TCGGTGGCCG TAATATCCTC GATCTGCCGA CGTCCGAAGT GCAGGCCCTG CGCCGCGACA TCCAGTTCAT CTTCCAGGAC CCGTTCGCCT CGCTCGACCC GCGCCTCACC GTGGGCTTCT CGATCATGGA GCCGCTGCTG GTGCACAGGA TCGGCACCCG CGAGGAGGCG CAGGCCCGGG TGGACTGGCT CATGGAAAAA GTGGGCCTGC CGCGCGAGCA TGCGCAGCGC TACCCGCACG AGTTCTCCGG CGGCCAGCGC CAGCGCATCG CGATCGCGCG CGCCCTGGCG CTCAACCCCA AGGTGGTGGT GGCCGACGAG TCCGTCTCGG CGCTCGACGT CTCCATCCAG GCGCAGATCG TCAACCTGAT GCTGGACCTG CAGCGCGAGC TGGGCGTGGC TTTCCTCTTC ATCTCGCACG ACATGGCGGT GGTGGAGCGC ATCAGCCACC GCGTGGCGGT GATGTTCCTC GGCCAGATCG TGGAGATCGG CCCGCGCCGC GCGATCTTCG AGAACCCGCA GCACGCCTAC ACGAAGAAGC TCATGGCCGC CGTGCCCATC GCCGATCCGG CGCGCCGCCA CCTCAAGCGC GCGCTGCTGG ACGGCGACAT TCCCAGCCCC ATCCGCGCCA TCGGCGACGA GCCCGCGGTG CAGCCGCTGG TGGAGGTGGG CCCGGGCCAT TCCGTGGCGC GCCACGCCAT CGCCAACCTG TACTGA
|
Protein sequence | MKPNASTAST TLALPEQRVL AVDDLTIRFA NSERTVDAVR NLSFHVDRGE TLAIVGESGS GKSVTSLALM RLVEHGGGRI IGGSVALRRR NGQVLDVARA SNAVMRDVRG ADVAMIFQEP MTSLNPVFTA GDQIAESIRV HQGKDRAAAR AEALRMLELV RIPEARNVLD RFPHQLSGGM RQRVMIAMAL SCKPQLLIAD EPTTALDVTI QAQILQLIRQ LQDEMHMGVI FITHDMGVVA EVADRVLVMY RGDKVEEGPS ERVFAAPRHA YTRALLSAVP KLGAMQGTDL PRHFDLIGAD GAQDTQPVLE STPADTRPAG AQPILRVKDL VTRFDLRAGL FNRVKRRVHA VERVSFDLYP GETLALVGES GCGKSTTGRS LLRLVESQSG AIEFGGRNIL DLPTSEVQAL RRDIQFIFQD PFASLDPRLT VGFSIMEPLL VHRIGTREEA QARVDWLMEK VGLPREHAQR YPHEFSGGQR QRIAIARALA LNPKVVVADE SVSALDVSIQ AQIVNLMLDL QRELGVAFLF ISHDMAVVER ISHRVAVMFL GQIVEIGPRR AIFENPQHAY TKKLMAAVPI ADPARRHLKR ALLDGDIPSP IRAIGDEPAV QPLVEVGPGH SVARHAIANL Y
|
| |