| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1652 |
|---|
| Symbol | |
|---|
| ID | 4666386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1811321 |
|---|
| End bp | 1812301 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639822853 |
|---|
| Product | hydroxymethylglutaryl-CoA lyase |
|---|
| Protein accession | YP_970013 |
|---|
| Protein GI | 120610335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG GCGGCACGGT GTGGCACGGC GCCGGGCGCC GCATCCACAT GCAGGAAGTG
GGCACGCGCG ACGGCCTGCA GATGGAGCAG GCCTTCGTGC CCACCGAAGA CAAGATCGCG
CTGGTGGACG CGCTGTCCGC CGCGGGCCTG GCCAAGATCG AGGTGACGGC CTTCGTGTCG
CCCGCGGCGA TCCCGGCGCT GCGCGACGCG GAGATCGTGA TGCGCGAGAT CGCGCGCCGC
CCCGGCGTCG TCTATGCCGC GCTGGTGCCG AACGTGCGCG GCGCGGAGCG CGCGATCGAG
GCGCGCACCG ACGAGCTGAA CCTGGTGATG TCCGCCAGCG AGACGCACAA CCTCGCCAAC
CTGCGCATGA CGCGCGCGCA GTCCTTCGCG GCCCTCGCGC AGGTGGTGGC CACGGCGCAG
GGCGCGGGCG TGGCGGTGAA CGTGTCGCTC TCGTGCGTGT TCGGCTGCCC GATGGAGGGC
GACGTCGCCG GGGCGGAGGT GTTCGGATGG GTGCAGCGCT TCGCCGACCT GGGCGTGGGC
GGCATCACGC TGTGCGACAC CACCGGCATG GCGTACCCCG CGCAGGTGGC GGCGCTGGTG
GCCGCGGCGC GCGCCCGCTG GCCGGCAATG GCCTTCACGC TGCACTTCCA CAACACGCGC
GGCATGGGCC TGGCCAACGT GCTGGCGGCG ATCGACGCGG GCGCGGACCG GTTCGACGCC
TCGCTGGGCG GGCTGGGCGG CTGCCCGTAC GCGCCGGGTG CCTCGGGCAA CGTCTGCAGC
GAGGAGGTCG TCCATGCGCT GGAGCTCATG GGCTACGACA CGGGCGTGGA CCTGCCGGCG
CTGCTCGCGG CCGCGCGGCG GCTGCCCGCG CTCATCGGGC ACGACATCCC GGGCCAGATC
GCCAAGGCGG GCGCGCGCCT GGACCTGCAC CCGGTGCCTG CGGACTTCGC GGCCATCCGC
GAGCGGGCGC TCGCGCGCTG A
|
|---|
| Protein sequence | MNAGGTVWHG AGRRIHMQEV GTRDGLQMEQ AFVPTEDKIA LVDALSAAGL AKIEVTAFVS
PAAIPALRDA EIVMREIARR PGVVYAALVP NVRGAERAIE ARTDELNLVM SASETHNLAN
LRMTRAQSFA ALAQVVATAQ GAGVAVNVSL SCVFGCPMEG DVAGAEVFGW VQRFADLGVG
GITLCDTTGM AYPAQVAALV AAARARWPAM AFTLHFHNTR GMGLANVLAA IDAGADRFDA
SLGGLGGCPY APGASGNVCS EEVVHALELM GYDTGVDLPA LLAAARRLPA LIGHDIPGQI
AKAGARLDLH PVPADFAAIR ERALAR
|
|---|
| |