| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1646 |
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| Symbol | |
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| ID | 4667800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1804648 |
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| End bp | 1805967 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822847 |
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| Product | general substrate transporter |
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| Protein accession | YP_970007 |
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| Protein GI | 120610329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTT CACACCAATC CTTCATCGCG GCTTCCGGCA GCGAAGCCGC CCCGTCCGCG
CCCGCGCAGT CCAAGGTGGG CACCGTCCTG CGCGTGACGG GCGGCAATTT CATGGAGATG
TTCGATTTTT TCCTGTTCGG CTTCTACGCC ACGCAGATCT CCAAGGCGTT CTTCCCCGCA
GGCAACGAGT TCGCCTCGCT CATGCTGACG TTCATGACCT TCGGCGCGGG CTTCCTCATG
CGGCCGCTGG GGGCGGTGTT CCTCGGGGCG TACGTGGACC GCGTCGGCCG CCGCAAGGGG
CTGATCGTGA CGCTGGCGCT GATGGCGCTG GGCACGCTGC TGATCGCCTG CGTGCCCGGC
CACGCCACCA TCGGCCTGGC GGCGCCGCTG CTGGTGCTGA TCGGGCGCCT GCTGCAGGGC
TTCTCGGCCG GCGTGGAGCT GGGCGGGGTG TCGGTGTACC TTGCCGAGAT AGCGACACCG
GGCCGCAAGG GCTTCTACGT GAGCTGGCAG TCGGCCAGCC AGCAGGTGGC GATCATCGTC
GCGGCGGCGC TGGGCTACTG GCTCAACGTG ACCTTCGTGC CGCAGGAGAT CGCGGACTTC
TACTGGCGGG TGCCGTTCTT CGTGGGTTGC CTGATCGTGC CGGTGCTGTT CATCATCCGC
CGCTCGCTGC AGGAGACCGA GGAGTTCAAG GCGCGCAGGC ACCGTCCTTC CACGCGCGAG
ATCTTCCGCT CCATCGTCTC CAACTGGGGC TTGGTGATCG CGGGGATGAT GATGGTGTCG
ATGACGACCG TGTCGTTCTA CCTCATCACC GTGTACACGC CGACCTTCGG CAAGAGCGTG
CTGCACCTGA GCACCACGGA CGCGCTGGTC GTGACGCTGT GCGTGGCGCT GTCCAACTTC
TTCTGGCTGC CGGTGATGGG CGCGCTCTCC GACCGCGTGG GCCGCAAGCC GCTGCTGGTG
GCCTTCACCG TGCTGACCAT CTTCACCGCC TATCCGGCCC TGAAGTGGCT GGTGGCCGCT
CCCGATTTCG CGCGCATGCT GGAGGTGGAG CTGTGGCTGT CCTTCCTGTA CGCGAGCTAC
AACGGCGCGA TGGTCGTCGC GCTGACCGAG GTGATGCCGG TGGACGTGCG CACGGTGGGC
TTCTCGCTGG CCTACAGCCT GGCGACCGCG GTGTTCGGCG GCTTCACGCC GGCCGTCGCC
ACGGGCCTGA TCGAATGGTC GGGCGACAAG GCCGCTCCGG GCTGGTGGAT GACGGCCGCC
GCGGTCTGCG GCCTGCTGGC CACGCTGCGG CTGTACCGCC GCGCGGCCGG CCGCGGCTGA
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| Protein sequence | MTPSHQSFIA ASGSEAAPSA PAQSKVGTVL RVTGGNFMEM FDFFLFGFYA TQISKAFFPA
GNEFASLMLT FMTFGAGFLM RPLGAVFLGA YVDRVGRRKG LIVTLALMAL GTLLIACVPG
HATIGLAAPL LVLIGRLLQG FSAGVELGGV SVYLAEIATP GRKGFYVSWQ SASQQVAIIV
AAALGYWLNV TFVPQEIADF YWRVPFFVGC LIVPVLFIIR RSLQETEEFK ARRHRPSTRE
IFRSIVSNWG LVIAGMMMVS MTTVSFYLIT VYTPTFGKSV LHLSTTDALV VTLCVALSNF
FWLPVMGALS DRVGRKPLLV AFTVLTIFTA YPALKWLVAA PDFARMLEVE LWLSFLYASY
NGAMVVALTE VMPVDVRTVG FSLAYSLATA VFGGFTPAVA TGLIEWSGDK AAPGWWMTAA
AVCGLLATLR LYRRAAGRG
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