Gene Aave_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1586 
Symbol 
ID4669834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1751885 
End bp1752670 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID639822788 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_969949 
Protein GI120610271 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0571917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTCA CAGGCAAGAC TGCACTCGTC ACGGGTTCCA CCAGCGGCAT CGGGCTGGGC 
ATCGCCAAGG CCCTGGCGCG CGAGGGAGCG AACGTCGTCC TCAACGGCTT CGGCGACGTG
GAGGCTCCCC GGGCCGGGGT GCTGGCCGCC GGCCAGGCGG CGGGCGCGCA GGTGGCCTAC
CACGGCGCGG ACATGTCCCG CGTGGCGGAG ATCGAGGACA TGATGAAGTA CGCGGCCGCC
CAGTTCGGCC GCGTGGACAT CCTGGTGAAC AACGCCGGCA TCCAGCACGT CGCCAACGTG
GAGGATTTCC CGGTGGAGAA GTGGGACGCG ATCCTGGCCA TCAACCTGAG CAGCGCCTTC
CACAGCACCC GCCTCGCGCT GCCGGCCATG AAGGCGGCCA ACTGGGGCCG CATCGTCAAC
GTGGCCTCGG TGCACGGGCT CGTGGGCTCC GCGCAGAAGT CGGCCTACGT GGCCGCCAAG
CACGGCATCG TAGGCTTCAC CAAGGTGACG GCGCTGGAGA CCGCGGCCAC GGGCGTGACC
TGCAACGCCA TCTGCCCGGG CTGGGTGCTC ACCCCGCTGG TGCAGAAGCA GGTGGACGCC
AAGGCCGCCG AGCACGGCCT CTCGAACGAG GACGCCACGC GCCTGCTGCT GGGCGAGAAG
GAGCCCTCGA TGCAGTTCAC CACGCCCGAG GAACTGGGCG AGCTGGCGGT GTTCTTCTGC
TCGCCGGCCG CCAACAACGT GCGCGGCGTG GCGTGGAACA TGGACGGCGG CTGGGCGGCG
CAGTAA
 
Protein sequence
MLLTGKTALV TGSTSGIGLG IAKALAREGA NVVLNGFGDV EAPRAGVLAA GQAAGAQVAY 
HGADMSRVAE IEDMMKYAAA QFGRVDILVN NAGIQHVANV EDFPVEKWDA ILAINLSSAF
HSTRLALPAM KAANWGRIVN VASVHGLVGS AQKSAYVAAK HGIVGFTKVT ALETAATGVT
CNAICPGWVL TPLVQKQVDA KAAEHGLSNE DATRLLLGEK EPSMQFTTPE ELGELAVFFC
SPAANNVRGV AWNMDGGWAA Q