Gene Aave_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1574 
Symbol 
ID4666181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1737404 
End bp1738066 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID639822776 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_969937 
Protein GI120610259 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.411149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCAC TTCTTCCTTC CTCTTCCCTG TTCTCCGGCG GGGCCGCGTC CGCCGCCTGG 
CTGGCCGGCT TCACGGTCTG CATGTCCCTG ATCGTCTCCA TCGGCGCGCA GAACGCCTAC
GTGCTGCGCC AGGCGGTCGC CGGGCGGCAC GTGCGGGCCT GCGTGGCCCT GTGCGTGCTG
GCCGACGCGG CGCTGATCGG CGCCGGCGTG GCCGGCATGG CGAAGCTGCT GGAGAGCGCT
CCGGGCCTGG CGCGCGTGCT CACCCTGGGC GGCGCCGTGT TCCTGCTGGC CTATGGGCTG
TTCGCATGGC ACCGGGCGTT GTTCGGTGCG GGCGCCGGCC TGCGCACGGA CGGCGAGCGC
ACCCGCCAGG GCCTGCTGGG CGTGCTGGGC ACCCTGGCCG CGATCACGCT GCTCAACCCG
CATGTGTACC TGGACACCGT GGTGCTCGTG GGCTCCATCG GCGCCCGGCA GGAGGGCTGC
CTCAAGTGGG TGTTCGTGGC CGGCGCGGCA TCGGCCAGCC TGCTGTGGTT CCTGATGCTC
GCCTTCGCGG GGCGGCAGCT GCAGGGCGTG TTCGCGAAGC CGGTGGCCTG GCGCCTGCTC
GATGGGCTCA CGGGCGCCAT CATGCTCACG CTGTCGTTCT GGCTCTGGCA GGGACTGGAA
TGA
 
Protein sequence
MWALLPSSSL FSGGAASAAW LAGFTVCMSL IVSIGAQNAY VLRQAVAGRH VRACVALCVL 
ADAALIGAGV AGMAKLLESA PGLARVLTLG GAVFLLAYGL FAWHRALFGA GAGLRTDGER
TRQGLLGVLG TLAAITLLNP HVYLDTVVLV GSIGARQEGC LKWVFVAGAA SASLLWFLML
AFAGRQLQGV FAKPVAWRLL DGLTGAIMLT LSFWLWQGLE