Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1574 |
Symbol | |
ID | 4666181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1737404 |
End bp | 1738066 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639822776 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_969937 |
Protein GI | 120610259 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.411149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGCAC TTCTTCCTTC CTCTTCCCTG TTCTCCGGCG GGGCCGCGTC CGCCGCCTGG CTGGCCGGCT TCACGGTCTG CATGTCCCTG ATCGTCTCCA TCGGCGCGCA GAACGCCTAC GTGCTGCGCC AGGCGGTCGC CGGGCGGCAC GTGCGGGCCT GCGTGGCCCT GTGCGTGCTG GCCGACGCGG CGCTGATCGG CGCCGGCGTG GCCGGCATGG CGAAGCTGCT GGAGAGCGCT CCGGGCCTGG CGCGCGTGCT CACCCTGGGC GGCGCCGTGT TCCTGCTGGC CTATGGGCTG TTCGCATGGC ACCGGGCGTT GTTCGGTGCG GGCGCCGGCC TGCGCACGGA CGGCGAGCGC ACCCGCCAGG GCCTGCTGGG CGTGCTGGGC ACCCTGGCCG CGATCACGCT GCTCAACCCG CATGTGTACC TGGACACCGT GGTGCTCGTG GGCTCCATCG GCGCCCGGCA GGAGGGCTGC CTCAAGTGGG TGTTCGTGGC CGGCGCGGCA TCGGCCAGCC TGCTGTGGTT CCTGATGCTC GCCTTCGCGG GGCGGCAGCT GCAGGGCGTG TTCGCGAAGC CGGTGGCCTG GCGCCTGCTC GATGGGCTCA CGGGCGCCAT CATGCTCACG CTGTCGTTCT GGCTCTGGCA GGGACTGGAA TGA
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Protein sequence | MWALLPSSSL FSGGAASAAW LAGFTVCMSL IVSIGAQNAY VLRQAVAGRH VRACVALCVL ADAALIGAGV AGMAKLLESA PGLARVLTLG GAVFLLAYGL FAWHRALFGA GAGLRTDGER TRQGLLGVLG TLAAITLLNP HVYLDTVVLV GSIGARQEGC LKWVFVAGAA SASLLWFLML AFAGRQLQGV FAKPVAWRLL DGLTGAIMLT LSFWLWQGLE
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