| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1562 |
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| Symbol | |
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| ID | 4666629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1728562 |
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| End bp | 1729242 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822764 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_969925 |
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| Protein GI | 120610247 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.888667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGGGC GAACCGCATC GACAACGACG CCCCACACCA CCATGAAGAC CGCGCAGATC
GAACCCTTCT TCGCCGCGCT GAAGGCCGCC AATCCCCAAC CCAACACCGA ACTGGAATAC
ACCACCGTCT TCGAGCTGCT GGCCGCCGTG CTGTTGTCGG CCCAGGCCAC CGACGTGGGC
GTGAACAAGG CCACGCGCAA GCTGTTCCCG GTGGCGGGCA CGCCGCAGGC CATCCTCGAC
CTGGGGCTGG AAGGGCTGGA GGGCTACATC AAGACCATTG GCCTGTACCG CAGCAAGGCC
CGCCACCTGA TGGAGACGTG CCGCATCCTG GTGGAGCGCC ACGGCGGCAC CGTGCCGCGC
ACGCGCGAGG AACTGGAAGC CCTGCCCGGC GTGGGCCGCA AGACCGCCAA CGTGGTGCTG
AACGTGGCCT TCGGCCAGCC CACCATGGCG GTGGACACGC ACATCTTCCG CGTGAGCAAC
CGCACCGGCC TCGCCCCCGG CAAGAACCCG CTGGCCGTGG AAATGCAGCT GCTCAAACGC
GTGCCCGCCG AATATGCCGT GGATTCGCAC CACTGGCTCA TCCTGCTGGG CCGCTACGTC
TGCCAGGCGA GAAAGCCGCG CTGCTGGGAA TGCGTGGTGG CGCCGTGGTG CGATTACCAG
CCGAAGACGC CGGCGCCCTG A
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| Protein sequence | MHGRTASTTT PHTTMKTAQI EPFFAALKAA NPQPNTELEY TTVFELLAAV LLSAQATDVG
VNKATRKLFP VAGTPQAILD LGLEGLEGYI KTIGLYRSKA RHLMETCRIL VERHGGTVPR
TREELEALPG VGRKTANVVL NVAFGQPTMA VDTHIFRVSN RTGLAPGKNP LAVEMQLLKR
VPAEYAVDSH HWLILLGRYV CQARKPRCWE CVVAPWCDYQ PKTPAP
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