Gene Aave_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1561 
Symbol 
ID4666729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1727699 
End bp1728259 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID639822763 
ProductFis family transcriptional regulator 
Protein accessionYP_969924 
Protein GI120610246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG CCGCGGCCCC GCGCCACGCG CCGCCGCATG CCGTGCGGAT CCGCCCCGCC 
ACGTTGCAGG ATGCGGCACA CCTGCCGGCC ATCGAGCAAT CCGCGGCCGG CTTGTTCCGT
GGCGCGGCCG GCCTGGAATG GCTGGCCGAC AGCCCCGGCA TGGCGCCGGC GGAACACGGG
CGGCTCATCC TGCGGGGCGC GGTCTGGGTG GCCGAGGCAG CGCCCGGCCA CCTGGCCGGC
TTCCTGGATG CCGAGGTTTT CGGACAGGAA TTGCATCTCT GGGAACTATC GGTGCACACG
GACTGGCAGC GCATGGGCAT CGGCACGAGG CTCATCCAGG CCGCGCAGGA GCATGCCGCA
ACGCAGGGCC TGGCGGCACT GACGCTGACC ACCTTCGCCG ACCTGCCGTG GAGCGCGCCG
GCCTACGCGA GGCTGGGGTT CCGCCCGGTC TCGCCGCCCG GGCCGCGGCT GCAGGGGGTG
ATGGATGTGG AGGCTGCCCA CGGGTTGCCG ATGGAGCGGC GGGTGGCGAT GCGGATGGGC
GTGAATCGGC CTGCGATGTA A
 
Protein sequence
MAGAAAPRHA PPHAVRIRPA TLQDAAHLPA IEQSAAGLFR GAAGLEWLAD SPGMAPAEHG 
RLILRGAVWV AEAAPGHLAG FLDAEVFGQE LHLWELSVHT DWQRMGIGTR LIQAAQEHAA
TQGLAALTLT TFADLPWSAP AYARLGFRPV SPPGPRLQGV MDVEAAHGLP MERRVAMRMG
VNRPAM