Gene Aave_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1545 
Symbol 
ID4668975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1710700 
End bp1711728 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content77% 
IMG OID639822747 
Productadenosylcobinamide-phosphate synthase 
Protein accessionYP_969908 
Protein GI120610230 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.112032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG GAGGCTCCGC GCTGCTGCAG GCCCTGCTGG CCGCGCTGCC CTGGGCCGCC 
GCCCTCGCGG CCGCGCTGGC GATCGACCGG TGGTGGGGCG AGCCGCCGGT GGCCCTGCAT
CCGGTGGTCT GGATGGGGCG CGCGCTGCAC TGGTGCGGCG AACGCACCGC GCCCGCGCAG
CCGGTGGCCG CGGATGCCCG GGCGTTCGTG CTGGGCGCGG CGGCCTGGCT GCTGATGGCC
TCGGTGGTGG CCGGTGCCGC CGGGGCGCTG CAGCACGCGG CACGGCAGCT GCCCGCATGG
TGGGCCGTGC CCGTGCTGGC CCTGCTGCTC AAGCCCCTGC TGGCCTGGCG CATGCTGCGC
GACGAGGTCG TGGCCGTGGA GGAGGCCCTG GCGCAATCGC TGGAGGCCGG CCGCGAGCGG
CTGTCGCGCC TGGTGAGCCG CGACGTCCAC GCGCTGCAGG CCGTGCAGGT GCGTGAATCC
GCCATCGAGT CGCTGGCGGA GAACCTGAAC GATTCCGTGG TGGCGCCGCT GTTCTGGTTC
GCGCTGCTGG GGCTGCCCGG CGCGGCGCTC TACCGCTTCG CCAACACCGC GGATGCCATG
TGGGGCTACC CCGGCATGCG CGGCGGGCGC TACTGGCAGT GGGCCGGCAA GTGGGCGGCG
CGCGCGGACG ACGTGCTCTC GTGGGTTCCC GCGCGCATCA CGGCGGTGCT GCTGGCGCTG
TCCGCGCGCC GCGGGCGCTG GGCCGCGGTG GCCCGGCAGG CGCGCCGGAC ACCGTCGCCC
AACAGCGGCT GGCCGATGGC CGCGATGGCG CTCGCGCTGG ACGTGCGGCT GTGCAAGCCC
GGCGTGTACA CCCTGCACCG CCGCGGCAGG GCCGCGGCCC CGGCGGACAC CCACCGGGCC
GCCGTGCTGG CCGCGCGGGT CGTGGCATGG TGCCTGCCGC TCGCCCTGGC GGCGATATGG
GCGCTGGAGT GGCTGCGTGT CGTCCTGCAT GGTGCCCTGC ATGCCGCCCT GGGAGGCGTG
CTGCCATGA
 
Protein sequence
MADGGSALLQ ALLAALPWAA ALAAALAIDR WWGEPPVALH PVVWMGRALH WCGERTAPAQ 
PVAADARAFV LGAAAWLLMA SVVAGAAGAL QHAARQLPAW WAVPVLALLL KPLLAWRMLR
DEVVAVEEAL AQSLEAGRER LSRLVSRDVH ALQAVQVRES AIESLAENLN DSVVAPLFWF
ALLGLPGAAL YRFANTADAM WGYPGMRGGR YWQWAGKWAA RADDVLSWVP ARITAVLLAL
SARRGRWAAV ARQARRTPSP NSGWPMAAMA LALDVRLCKP GVYTLHRRGR AAAPADTHRA
AVLAARVVAW CLPLALAAIW ALEWLRVVLH GALHAALGGV LP