| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1534 |
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| Symbol | |
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| ID | 4668982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1699123 |
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| End bp | 1701186 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822736 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_969897 |
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| Protein GI | 120610219 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.25746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.789676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGCC CGGCCGTCGA TGTCGCGTGG CGGTCGCTGT TCGCGGGCCT GCGCGAAGCG
CTCTGGCTGG TCGATGCGCA GTCGCTGGAC GTGGTGATGT GCAACCGGGC GGCGGCCGAG
CTGGCCGGCC GGCCGCGGGA GGCCATGGAA GGGCGCCCGG TGCACCTGCT GGCCAACACG
CCCGAGGATC TCGCGTTCTG GTCGCAGGAC CTGGCCGGGC TGCGGGCGGG TATCCATTCC
TATTCGGGCA TGCTGCGCCC CGACGGGTCC CTCGTGCCGG TGGACCGCCG CGTCGCCGCC
GTCGAGTCGC CCGAGGGCAT GCCGCTGCTG GTGCTGGGCA TGCTGGACCG CAGCGAGCAG
GCGTCCATCC AGGACGAGCT CGAGCGGCTG CTTTCGGAGC TGCGCGCCAC GCTCGACTCC
GCTGCCGACG GCATGCTGGT CTGCGACATG GGCGGCCGCG TGCGGGCCTT CAACCAGCGC
CTGGCCTGGC TGTGGAACAT GCCGGACGAC CTGCTCGTGC GGCGCGACGA CGCGGCCGTG
GAAGCGCACA TGGCCGCGCA GGTCACGGAC GCCGACGCCT ACCGCGCGCG GCTGCTGGGC
ATCGCGCAGT TCCCGGAGGA GGAAACCCTC GACATCCTGC ACCTGCGTAC GGGCACGGTG
ATCGAGCGCC GCTCGGTGCC GCAGATGAGC CATGGCCGTC CCATGGGCCG CGTGTATTCC
TTCCGCGACC TCACCCTGCA GCATGCCGCG CAAAAGCGGA TCGAGCAGCT GGCGTACAGC
GACGTGCTCA CGGGCCTGCC CAACCGCCTG CTGCTGTCGC GCTGCGTCGC CTCGGCGCTG
GAAACCGCGC GCGCGCAGGG CGGCGGCTTC GCCATCCTGT TCATCGACCT CGACCGTTTC
AAGATCATCA ACGATTCGCT GGGGCATCTC TTCGGCGACC GGGTGCTGCA GCTCGTGGCG
CAGCGCCTGC GGGGCTGCCT GCGGCAGAAC GACATGCTGT GCCGCCTGGG AGGCGACGAG
TTCGTGCTCC ACCTGGATGA GGGTGACGCG TCCATGGCCG AGGCCGTGGC GTGCCGCATC
CTGGAGGAGA TGCGCCAGCC CTTCATGCTC GACGGCATGG GCTTTTCCAT CCAGTGCAGC
ATCGGCATCG CGCTGCACCC GCGGGACGGC GAGACGCTGG ACGACCTGAT CAAGCAGGCG
GACACCGCCA TGTACCGGGT CAAGGAGCGC GGCCGGGGCA GCTACGGGTT CTACCACCCG
CAGATGAATG CCGACATGCT CTCGCGCATG CAACTGGAGC ACGCGATGCG CCAGGCGCTG
GACCGCGGCG ATTTCGCCGT GCACTACCAG CCGCAGGTGG AGATGGCCTC GGGCCGCGTG
GTGGGCGCCG AAGCCCTGCT GCGCTGGAAC GATCCCGGGC TGGGCGCGGT GTCGCCGGGC
GTCTTCATCC CGCTGGCGGA AGAGTCGGGC TATATCGTGA CCCTGGGAGC CTGGGTGCTG
GAGCAGGCGA TCCGCGAGGC GGCCGAGTGG ATGCGCGCCG GCACGCCCCT GGTGGTGGCG
GTGAACGTGT CCGCGCTGGA GTTCCGGCAG TCCGGCTTCG TGGAGCGCCT CGTGGCGCTG
CTGCGCAGCC ACGGGCTGCC GGCATCGCTG CTGGAGCTGG AACTGACCGA GACGATCCTG
CTGCAGGATG CGCAGGAAAT GGCGCAGCGC CTCGCGGCCC TGGCCGAGCT GGGCGTGGGC
CTGTCGATCG ACGATTTCGG CACGGGCTAT TCGAGCCTGG CCTATCTCAA GAAGCTCCGC
ATCCACAAGC TCAAGATCGA CCAGTCGTTC GTGCGCGGCC TGCCGGACGA CGAGAGCGAC
CGGGCGATCA TCGAGGCGAT CGTGCACATC GGCCGGGCGC TGCGCATCCG GGTGGTGGCC
GAGGGCGTCG AGACGCCGCA GCAGCGCGAG GCGCTGCAGG CCTTGCAGTG CCACTACTTC
CAGGGTTTCC TGGTGGCACC GGGGTTGCCT GCGGAGGCTT TCCGCGCCCT GGTCGCGCGG
GATGGCTGCG AACCACCGGC ATGA
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| Protein sequence | MNRPAVDVAW RSLFAGLREA LWLVDAQSLD VVMCNRAAAE LAGRPREAME GRPVHLLANT
PEDLAFWSQD LAGLRAGIHS YSGMLRPDGS LVPVDRRVAA VESPEGMPLL VLGMLDRSEQ
ASIQDELERL LSELRATLDS AADGMLVCDM GGRVRAFNQR LAWLWNMPDD LLVRRDDAAV
EAHMAAQVTD ADAYRARLLG IAQFPEEETL DILHLRTGTV IERRSVPQMS HGRPMGRVYS
FRDLTLQHAA QKRIEQLAYS DVLTGLPNRL LLSRCVASAL ETARAQGGGF AILFIDLDRF
KIINDSLGHL FGDRVLQLVA QRLRGCLRQN DMLCRLGGDE FVLHLDEGDA SMAEAVACRI
LEEMRQPFML DGMGFSIQCS IGIALHPRDG ETLDDLIKQA DTAMYRVKER GRGSYGFYHP
QMNADMLSRM QLEHAMRQAL DRGDFAVHYQ PQVEMASGRV VGAEALLRWN DPGLGAVSPG
VFIPLAEESG YIVTLGAWVL EQAIREAAEW MRAGTPLVVA VNVSALEFRQ SGFVERLVAL
LRSHGLPASL LELELTETIL LQDAQEMAQR LAALAELGVG LSIDDFGTGY SSLAYLKKLR
IHKLKIDQSF VRGLPDDESD RAIIEAIVHI GRALRIRVVA EGVETPQQRE ALQALQCHYF
QGFLVAPGLP AEAFRALVAR DGCEPPA
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