| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1510 |
|---|
| Symbol | |
|---|
| ID | 4668688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1674201 |
|---|
| End bp | 1674869 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639822712 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_969873 |
|---|
| Protein GI | 120610195 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.535687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.154359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATAC CGACAGCCTC CCTGCACGAC AACGTCGCCG AACGCCTGCG CGAGCAGATC
TTCGCCGGGG AGTTCGCGCC GGGCGCCTTC CTGGATGAAA CGGCACTGTG CGAGCGCCTC
GCCATTTCCC GCACCCCGCT GCGCGAGGCC CTGAAGGTGC TCACGGCCGA GGGCCTGCTG
CGCCATGAGC CCCGGCGGGG CTGCTTCGTG GCCGAGGTGA CGGAGCGGGA CCTGGACGAA
ATCTTTCCCG TGATCGCCCT GCTGGAGGGC CGCGCCGCGC ACGAGGCGAC GGTGCGCGCC
GGCATGGCCG ACGTGGCTGC GCTGGAGGTG CTGCACGAGC GGCTGCAGGA GCACGCGGCG
GCCGGGCGCA TCGCCGAGTA CTACGCGGCC AACCATGCCA TCCACGAGGC CTTCATCGTG
CTGGCCGACA ACCGCTGGCT GGCCCAGGTG ATCGGCGACC TGCGCAAGAT CCTGCGCCTG
GCGCGGCTGC AGCAATTGCA TGCGCCCGGC CGCCTGCAGC AGAGCCTGGC GGAGCACCTG
GCGGTGTTCG CCGCGCTGCG GCGCGGGGAC GCCGAGGCCG CCGAGCAGGC CATGCGCAAC
CATCTTCTCG CGCAGCGCGT GGCGCTGCGC GACATCGCCC GCCACCACCA CTCCAGGATC
GCTCCATGA
|
|---|
| Protein sequence | MRIPTASLHD NVAERLREQI FAGEFAPGAF LDETALCERL AISRTPLREA LKVLTAEGLL
RHEPRRGCFV AEVTERDLDE IFPVIALLEG RAAHEATVRA GMADVAALEV LHERLQEHAA
AGRIAEYYAA NHAIHEAFIV LADNRWLAQV IGDLRKILRL ARLQQLHAPG RLQQSLAEHL
AVFAALRRGD AEAAEQAMRN HLLAQRVALR DIARHHHSRI AP
|
|---|
| |