| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1496 |
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| Symbol | |
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| ID | 4669048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1659893 |
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| End bp | 1661248 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822699 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_969860 |
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| Protein GI | 120610182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0787924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.370511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCCCGACGCC TCCTTCCACC TCCACGGGCA CCGGCGCCCT CCAGGCCACC
CAGGTGGCCC AGGCCCATCC CGCTCCGGCG CCCGACGCCA ACCCCTGGGC GGCAGCAGGC
GACGGCCCCG CCGCCGTGGC TTCGTTCGGC ACGCAGGCGA CCCCTGCCAC CGGCACGCCC
CCCGCCGCAC CCGCGGCAGA CCCCTGGGCC GCCTCTTCGG CCACCGGCTC CGATGCCGGC
GGCGCGGACT GGCTGAACGC CGCGCCCGAC CCAACCGCCG TCAGCGGCAC GCTGGCCCAC
GGCGCCCCGG GCGGCGCGGG CGATCCCTCG CAGGCCGCGG GCGGCCTGCA CCTTTCCCAG
CTCTGGGACG GATCGCTTCC GGTGGAACAT TGGATCAACC AGGGCCTGAC CTGGACGGTG
GAGCACTTCC GGCCCGCATT CCAGGCCGTG CGCGCACCGG TGGACGCCAC GCTCGCCGGC
GTGCAGTCGG TGCTCACCGG CCTTCCCACG CTGGGCATGG TCGCCGTCGT GGGCCTTCTG
GCATGGCAGT TCGCGGGCCG CGCGCTCGCC CTGGGCGCGG TGGTCTCGCT GCTGCTGGTG
GCGATGCTGG GCATCTGGCA GGAGGCGATG GTGACGCTCT CGCTCGTGCT CACCTCGCTG
GCGTTCTGCC TGGTGCTGGG ACTGCCCCTG GGCATCCTGC TGGCCAGCAG CGACCGGGCA
CAGCGCCTGC TGCGCCCGGC GCTCGATGCC ATGCAGACCA CTCCGGCCTT CGTGTACCTC
GTGCCGGTGG TGATGCTCTT CGGCATCGGC AACGTGCCGG GCGTGGTCGT GACCATCGTG
TTCGCGCTGC CGCCGCTGGT GCGCCTGACC AACCTGGGCC TGCGGCAGGT GCGCCCCGAC
CTGGTGGAAG CCGCCCGCGC CTACGGTGCC TCGCCGCTGC AGATGCTCTG GAAAGTGCAG
CTGCCGCTGG CCATGCCGTC GATCATGGCC GGTATCAACC AGGCCCTGAT GCTGTCGCTC
TCGATGGTGG TGATCGCCTC GATGATCGCC GTGGGCGGCC TGGGCCAGAT GGTGCTGCGC
GGCATCGGCC GGCTGGACAT GGGCCTGGCC ACCGTGGGCG GACTGGGCAT CGTGCTGCTC
GCGATCACGC TGGACCGACT GACGCAAGCC ATGGGCCAGC CGCGGCGCGG CGCGCGCCAC
TGGTGGCAGA CCGGCCCCGC AGGCCTGGTG GTGGCCGCCT TCGCCGCACT CCGCCCGGCT
CCCGGGCAAG CCCCCCGCGG CCGCACCGCC GCCGCGGAAC CCGCCCCCGC CCTGTCCGCC
GCGGAAGAGC CCACGCTGGC GGGAGCCGCC CGCTGA
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| Protein sequence | MNATPTPPST STGTGALQAT QVAQAHPAPA PDANPWAAAG DGPAAVASFG TQATPATGTP
PAAPAADPWA ASSATGSDAG GADWLNAAPD PTAVSGTLAH GAPGGAGDPS QAAGGLHLSQ
LWDGSLPVEH WINQGLTWTV EHFRPAFQAV RAPVDATLAG VQSVLTGLPT LGMVAVVGLL
AWQFAGRALA LGAVVSLLLV AMLGIWQEAM VTLSLVLTSL AFCLVLGLPL GILLASSDRA
QRLLRPALDA MQTTPAFVYL VPVVMLFGIG NVPGVVVTIV FALPPLVRLT NLGLRQVRPD
LVEAARAYGA SPLQMLWKVQ LPLAMPSIMA GINQALMLSL SMVVIASMIA VGGLGQMVLR
GIGRLDMGLA TVGGLGIVLL AITLDRLTQA MGQPRRGARH WWQTGPAGLV VAAFAALRPA
PGQAPRGRTA AAEPAPALSA AEEPTLAGAA R
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