| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1492 |
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| Symbol | |
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| ID | 4669171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1655081 |
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| End bp | 1656301 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822695 |
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| Product | putative DNA topoisomerase, type I |
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| Protein accession | YP_969856 |
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| Protein GI | 120610178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.236582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.564948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTTC CAGCCGACCG CACCGCCCGC TCCCGCGACG CCGAGCCCCG CCCCGCTCCG
CCGGAGCGAC TTCCCGGCGG CCTGCGCTAC GTCCACCCCG ACACCCTGCC GGGACTCACT
CGCGTGCTGC GCGGCAAGCA CTTCAAATTC CGCACGCCCG ACGGGCAGTG GGTGACGGAC
GAGGAAGAGA TCGCCCGCAT CCGCAAGCTG GCGATTCCGC CTGCCTACAC GAATGTCTGG
ATCTGCCCGC TGCCCGAAGG CCACCTGCAG GCCACCGGGC TGGATGCGCG CGGACGCCGG
CAGTACCGCT ACCACCCCGA ATGGCGCCAG CAGCGCGACG AGGCCAAGTT CGAGCGCATG
CAGGCCTTCG GCCGGGCCCT GCCGCGCATC CGCGCCCGCG TGGCGCGCGA CCTCCGCCCC
CGGCGCGGCG AGCCCGCGCT CTCGCGCACG GTGGTGCTGG CGACCATCGT CCGGCTCCTG
GACACGACCT TCCTGCGCGT GGGCAACGAG GAGTACGCGG CCGCCAACCG CTCCTACGGC
CTCACCACGC TGCGCAACCG GCATGCGGGC GTGCGCGGCA GCAGGCTCAC CCTGCGCTTT
CGCGGCAAGA GCGGCGTGGA GCAGCAGGCG ACCGTGGACG ACCCGCGCGT GGCCCGCGTG
GTGCGCCGGT GCCAGCAGCT GCCGGGGCAG GAGTTGTTCC AGTACGAGGA CGAAGACGGC
ACACGGCACA CCGTGGGCTC CGGCGACGTG AACGACTACC TGCACGAGAT CGCGGGCACG
GACGAGGGAG CGCCGGGTGG CGGCATGCGC TTCACCGCCA AGGATTTCCG GACCTGGCAC
GGCACGGCCC AGGCCCTGGA GCTCACGCGC ATCGCCTGCA CGCAGCCCGA GGGCGCCCCG
GTCGCGACCG CCAAGCACAT CCTGGCGGAA GTGGCGCGCC AACTGGGCAA CACCCCGGCG
GTCTGCAAGA AGTCCTACAT CCATCCCGCC GTGCTGGAAC TCGGTTCACG GCTCGCGTCG
GACGCCGGCC CTGGCATGCA GGCGGTGTGG CAGCGCATGG GCGAGCGCGC CACCGGGGCC
CGGGGCCTCA GCGCCGTGGA GCGCCGGCTG ATGGCCTTCC TGCAGGACAC CGCCCGTGCC
CGGGCGCGCG CCGAAAGAAA AGCCCGCGCC GCCGGGCCTG CCCTGCCGGC CCGGCGCGCC
CGCCGCAAGG CGGCGGCCTG A
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| Protein sequence | MYLPADRTAR SRDAEPRPAP PERLPGGLRY VHPDTLPGLT RVLRGKHFKF RTPDGQWVTD
EEEIARIRKL AIPPAYTNVW ICPLPEGHLQ ATGLDARGRR QYRYHPEWRQ QRDEAKFERM
QAFGRALPRI RARVARDLRP RRGEPALSRT VVLATIVRLL DTTFLRVGNE EYAAANRSYG
LTTLRNRHAG VRGSRLTLRF RGKSGVEQQA TVDDPRVARV VRRCQQLPGQ ELFQYEDEDG
TRHTVGSGDV NDYLHEIAGT DEGAPGGGMR FTAKDFRTWH GTAQALELTR IACTQPEGAP
VATAKHILAE VARQLGNTPA VCKKSYIHPA VLELGSRLAS DAGPGMQAVW QRMGERATGA
RGLSAVERRL MAFLQDTARA RARAERKARA AGPALPARRA RRKAAA
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