Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1491 |
Symbol | fumC |
ID | 4669282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1653683 |
End bp | 1655068 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639822694 |
Product | fumarate hydratase |
Protein accession | YP_969855 |
Protein GI | 120610177 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0535004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.876261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC GTACGGAACG CGATACTTTC GGCCCCATCG AGGTCCCGGC CCACCGGCTC TGGGGCGCGC AGACGCAGCG CTCGCTGCAG AACTTCGACA TCTCCGGCGA GCGCCAGCCG CGCGAGATCC TCCATGCCCT GGCCCTGGTC AAGCGTGCCT CGGCCAGCGT GAACCACGCC CTGGGCCTGC AGGACGCCAG GAAGACCGAG GCCATCATCG CCGCGGCCGA CGAGGTGGCC GCCGGCCGGC ATCCGGACGA GTTCCCGCTC GTCGTCTGGC AGACCGGCTC GGGCACGCAG ACCAACATGA ACATGAACGA GGTGCTGGCC AACCGGGCGA GCGAAATCCT CGGCGGCGAG CGCGGCGAGG GCCGGGCGGT CCATCCCAAC GACGACGTGA ACCGCAGCCA GTCCAGCAAC GACGTGTTCC CCACGGCCAT GCACGTGGCG GCCGTGGAGG CGCTCACCCA CCGACTGCTG CCCGCCATCG CGAAGCTGCG CGCCACCCTG GAGAAGAAGG CGGCGGAGTT CGACGGTATC GTGAAGATCG GGCGCACGCA CCTGCAGGAC GCGACCCCTC TCACGCTCGG CCAGGAAATC TCCGGCTGGG TGGCCCAGTT GGCGCACGGC GAAAAGCACG TGTGCGACGC GCTGCCCCAT CTCTGCGAAC TGGCGCTGGG CGGCACCGCC GTGGGCACTG GGCTGAATGC GCCCAGGGGC TACGCCGAGG GCGTGGCGAA GGAACTGGCC CGGCTGACGG GGCTGCCTTT CGTCACCTCG CCCAACAAGT TCGAGTCGCT CGCCTCGTGC GACGCGCTGG TGCATGCCCA TGGCGCGCTC AAGACGCTGG CGGCCAGCAT GATGAAGATC GCCAACGACG TGCGCTGGCT GGCGAGCGGC CCGCGCAGCG GCATCGGGGA GATCACGATT CCCGAGAACG AACCGGGCTC GTCGATCATG CCCGGCAAGG TGAACCCCAC GCAAAGCGAG GCCGTCACCA TGCTGGCGGC GCAGGTCTTC GGCAACGACG TGGCCATCAA CATCGGCGGC GCCTCCGGCA ATTTCGAGCT GAACGTGTTC CGCCCGATGG TGGCCCACAA CTTCCTGCAG AGCGTGCGCC TGCTCGCCGA CGGCATGGTG AGCTTCAACG ACCACTGCGC CGTGGGCATC GAGCCCAACC GCGAGCGCAT CGGCGAGCTG GTGGAGCGTT CCCTGATGCT GGTGACGGCG CTCAATACCC ACATCGGCTA CGACAAGGCG GCCTTCATCG CCAAGAAGGC CCACAAGGAA GGCACCTCGC TGCGCGAGGC GGCCGTGGCG TCGGGCCACG TGACGGGCGA GCAGTTCGAC CAGTGGGTGG TGCCCGGCAA CATGGTGGGC CGCTGA
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Protein sequence | MTTRTERDTF GPIEVPAHRL WGAQTQRSLQ NFDISGERQP REILHALALV KRASASVNHA LGLQDARKTE AIIAAADEVA AGRHPDEFPL VVWQTGSGTQ TNMNMNEVLA NRASEILGGE RGEGRAVHPN DDVNRSQSSN DVFPTAMHVA AVEALTHRLL PAIAKLRATL EKKAAEFDGI VKIGRTHLQD ATPLTLGQEI SGWVAQLAHG EKHVCDALPH LCELALGGTA VGTGLNAPRG YAEGVAKELA RLTGLPFVTS PNKFESLASC DALVHAHGAL KTLAASMMKI ANDVRWLASG PRSGIGEITI PENEPGSSIM PGKVNPTQSE AVTMLAAQVF GNDVAINIGG ASGNFELNVF RPMVAHNFLQ SVRLLADGMV SFNDHCAVGI EPNRERIGEL VERSLMLVTA LNTHIGYDKA AFIAKKAHKE GTSLREAAVA SGHVTGEQFD QWVVPGNMVG R
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