| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1490 |
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| Symbol | |
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| ID | 4668845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1651238 |
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| End bp | 1653412 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822693 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_969854 |
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| Protein GI | 120610176 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.261971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGC ACTACGATCC GATGGTGGTG GCGGCGTCGT TCGCCATCGC GGTGCTGGCC
AGCTACGTCA CGCTGGATCT GGCGCGCCGC GTGCATGTGT CGCAGCGGCA CATCGGCCTG
GTCTGGTGGG CCGCAGGCTC GGTGGTGATG GGCACGGGCA TCTGGGCCAT GCACTTTTTG
GGCATGCAGG CATTCCAGCT GCCCATCGCG CTGGGATTTT CCGGCGGCCT CACCCTGCTG
TCCTGGCTGG CGGCGGTGCT GGCTTCGGCA CTGGCGCTGG GGATGGCCAG CCTGCCGCGG
TTCGGCCGGT GGCAGATCCT CTTCGGCGCC GTATGCATGG GCAGCGGTAT CAGCGGCATG
CACTACATCG GCATGAAAGC CATGAAGATG TCCATCGACA TCGTGTGGGA TCCCGTGCTG
GTGGCGCTGT CGGTCGCAGT GGCGTTTTTC GCCTCGGCCA CGGCGCTGCG CATCTTCCAG
TGGCTGATCC ACGTACGGCA GGACCGGCGC AGGGCGTGGT ACCAGGCGGC TGCGGCGCTG
ATCATGGGCA TCGCGATCTG CGGCATGCAC TACACGGGCA TGGCTGCGGC GTCGTTCCCC
GAAGGCTCGA TCTGCCTGAG CGCCGACGGC CTCGGCGGAC CGGGCCTGAC GGCCATGGTA
TTGCTGTCGT CCGGCATGCT GCTGCTGAGC ACGCTGTTCA CCGCCGTGCT GGACGCGCGC
CTGCAGAGCA CGGCCCGGCA ACTCAACGCC TCCCTGCAGG AGAGCAATGC GCGCCTCACC
GAAGCCAATG CCCAGCTGCA GAAGCAGGCC TTCGCGGACC CCCTGACCCT GCTGCCCAAC
CGGCTACTGT TCGAGGACCG CCTGTCCCAC GCCCTGCTGC GCCTGGACCG CATGCGGCGC
CGCGATGCCG GCCAGCGTCT GGGCGTGATG TTCGTGGACC TGGACGGCTT CAAGCCCATC
AACGACTCCT TCGGCCATGC GGCGGGGGAC GCCATCCTGC GCAGCGCCGC GGAGCGCCTG
CGGCTGCAGG CCCGCGAGAG CGACACGGTG GCCCGCGTGG GCGGCGACGA ATTCCTGCTC
CTGCTGGAAA ACGTGAACGA CCCGGCCGAC TGCCTCGCGG TGGCGAACCG GCTGCTCAAT
TCCCTGGGCC AGCCGTTCGA GGTGGCGGGC AAGACCGTGC AGATCGCCTG CTCCGTCGGC
ATCGTGGTGT ATCCGGACCA CGGCGAGCGC GACAAGCTCG TCGCGAACGC CGACGCCGCC
ATGTATGCCG CCAAGCGGGC CGGCGGCAAC GGCTATGCGA TGTTCGAGTC GCACATGGAC
TCCGACGCCA CGGCCCAGCT GTCGCTTCAG CACGACCTGC GGCAGGCGAT AGCCCGCGGA
GAACTGTCGC TGCACTACCA GCCCAAGATC GACGCCCGGC GCGGCCGCAT CAACGGCGTG
GAGGCCCTGC TGCGCTGGCG GCATCCCCTG CGGGGCAACG TCAGTCCGGC CGAGTTCATT
CCCGTGGCCG AGCGCTTCGG GCTCATCGCG CAGCTCGGCA ACTGGGTGAT CGAGGAGGCC
TGCAGGCAGA TGGCCGCGTG GAGCTGGGAC GGGCTGCGCA TGCGCGTGGC CATCAACCTC
TCGGCCTACC AACTGCGCGA AAGCGGTCTT GCCGACCGCA TCCGCGACGC CCTGCAGCGG
CACGGCGTGC CGGCCTCGCA CCTGCTGTGC GAGATCACCG AATCGGTGGC GATGGAAGAC
ACGCGTGCCA CCCAGCGGGC TATCGAGGAA CTGGGCCGCA TCGGCGTGTA CCTGTCCATC
GACGACTTCG GCACGGGCTA TTCCAGCCTG CACTACCTGC GCAGCCTGCC GGCGCGCCAG
CTCAAGATCG ACCGCAGCTT CGTGCGCGAC CTGGAGGAGC AGGAAGACGC ACGCGCCGTG
GTGGACGCCG TGGTGCGGCT GGCGCACGCC CTGGGCCTGC GCGTCGTGGC CGAAGGCGTG
GAAACGGAAG GCCAGCGCGA CATCCTGGCG GCCATGCACT GCGACGAACT GCAGGGCTTC
TACTTCGCCC GGCCCATGCC GGCCGACACC CTGCTCGCCT GGGCCGTGGG CGACAAGCCC
GAGGGCGCGG CGGATTTCAG CCCGTCCATC ATCGACCTGC AGGCGCTCGA CCCCTCAGTG
GACGCACCGG CCTGA
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| Protein sequence | MPSHYDPMVV AASFAIAVLA SYVTLDLARR VHVSQRHIGL VWWAAGSVVM GTGIWAMHFL
GMQAFQLPIA LGFSGGLTLL SWLAAVLASA LALGMASLPR FGRWQILFGA VCMGSGISGM
HYIGMKAMKM SIDIVWDPVL VALSVAVAFF ASATALRIFQ WLIHVRQDRR RAWYQAAAAL
IMGIAICGMH YTGMAAASFP EGSICLSADG LGGPGLTAMV LLSSGMLLLS TLFTAVLDAR
LQSTARQLNA SLQESNARLT EANAQLQKQA FADPLTLLPN RLLFEDRLSH ALLRLDRMRR
RDAGQRLGVM FVDLDGFKPI NDSFGHAAGD AILRSAAERL RLQARESDTV ARVGGDEFLL
LLENVNDPAD CLAVANRLLN SLGQPFEVAG KTVQIACSVG IVVYPDHGER DKLVANADAA
MYAAKRAGGN GYAMFESHMD SDATAQLSLQ HDLRQAIARG ELSLHYQPKI DARRGRINGV
EALLRWRHPL RGNVSPAEFI PVAERFGLIA QLGNWVIEEA CRQMAAWSWD GLRMRVAINL
SAYQLRESGL ADRIRDALQR HGVPASHLLC EITESVAMED TRATQRAIEE LGRIGVYLSI
DDFGTGYSSL HYLRSLPARQ LKIDRSFVRD LEEQEDARAV VDAVVRLAHA LGLRVVAEGV
ETEGQRDILA AMHCDELQGF YFARPMPADT LLAWAVGDKP EGAADFSPSI IDLQALDPSV
DAPA
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