| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1489 |
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| Symbol | |
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| ID | 4668973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1649597 |
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| End bp | 1651156 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639822692 |
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| Product | fumarase |
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| Protein accession | YP_969853 |
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| Protein GI | 120610175 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0914296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCATCCGGTA CCACGACCTC GTGGAATCCG TCGCCGCGTC CCTGCAGTAC
ATCAGCTACT ACCACCCCGC CGACTTCATC GCCCACCTGG CCCGCGCCTA CGAGCGCGAG
CAGAGCCCGG CGGCCAGGGA CGCGATGGCG CAGATCCTCA CCAACAGCAA GATGAGCGCC
ACCGGCCAGC GCCCCATCTG CCAGGACACC GGCATCGTCA ACGTGTTCCT GAAGATCGGC
ATGGACGTGC GCTGGGAGGG CTTCCCGGCC GGCCAGGGCC TGGAGGACGC CGTCAACGAA
GGCGTGCGCC GCGGCTACAA CCATCCCGAC AACACGCTGC GCGCGAGCGT CGTGGCCGAT
CCGCAGTTCC TGCGCAAGAA CACGAAGGAC AACACCCCTG CCGTGATCTT CACGCAGATC
GTGCCCGGCA ACACCGTGGA CATCACCGTC GCGGCCAAGG GCGGCGGCAG CGAGAACAAG
TCCAAGATGG TCATGATGAA CCCCAGCGAC AACCTGGTGG ACTGGGTGCT CAAGACCGTG
CCCACCATGG GCGCCGGCTG GTGCCCTCCG GGTATGCTGG GCATCGGCAT CGGCGGCACG
GCGGAGAAGG CCGTCCTGCT GGCCAAGGAA AGCCTGATGG ACGACCTGAA CATGTACGAG
CTGCAGGCCA AGGCCGCGCG CGGCGAGAAG CTCGACCAGG TGGAGGAGTT GCGCCTGGAG
CTGTTCGACA AGGTCAACGC CCTGGGCATC GGCGCGCAGG GCCTGGGCGG CCTCACCACC
GTGCTGGACA TCAAGATCAA GATGTATCCC ACGCATGCGG CCTCCAAGCC GGTCGCCATG
ATCCCGAACT GCGCCGCCAC GCGCCATGCG CACTTCGTGC TGGACGGCTC CGGCCCCGTG
TACCTGGAGG CACCGTCGCT GGACCTGTGG CCGAAGATCG ACTGGGCCCC CGACTACAAC
AAGAGCCGCC GCGTCAGCCT CGATACGCTG ACCAGGGAGG AGGTGGCCAG CTGGAAGCCC
GGCGACACGC TGCTGCTCAA CGGCAAGATG CTCACCGGCC GCGACGCCGC GCACAAGCGC
ATCCAGGACA TGCTGGCCAA GGGCGAGCCG CTGCCCGTGG ACTTCACCAA CCGCGTGATC
TACTACGTCG GCCCGGTCGA TCCGGTGCGC GACGAGGCCG TAGGCCCCGC CGGCCCGACC
ACGGCGACAC GCATGGACAA GTTCACCGAC ATGATGCTCG CGCAGACCGG CCTGATCGCG
ATGATCGGCA AGTCCGAGCG CGGCCCCGTC GCCATCGAGG CGATCAAGAA GCACCAGTCG
GCCTACCTGA TGGCCGTGGG CGGCGCCGCC TACCTGGTCA GCAAAGCCAT CAAGACCGCG
AAGGTGGTCG GCTTCGAAGA CCTGGGGATG GAAGCGATCT ACGAATTCGA CGTGGTGGAC
ATGCCCGTGA CGGTGGCCGT GGACGCCGGC GGCACCAGCG CCCACATCAC GGGCCCGGCC
GAATGGCAGA AGCGCATCGC CACTGGCGAG TTCAAGTCCA TCGACGTCGT GGCGGCCTGA
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| Protein sequence | MSTTIRYHDL VESVAASLQY ISYYHPADFI AHLARAYERE QSPAARDAMA QILTNSKMSA
TGQRPICQDT GIVNVFLKIG MDVRWEGFPA GQGLEDAVNE GVRRGYNHPD NTLRASVVAD
PQFLRKNTKD NTPAVIFTQI VPGNTVDITV AAKGGGSENK SKMVMMNPSD NLVDWVLKTV
PTMGAGWCPP GMLGIGIGGT AEKAVLLAKE SLMDDLNMYE LQAKAARGEK LDQVEELRLE
LFDKVNALGI GAQGLGGLTT VLDIKIKMYP THAASKPVAM IPNCAATRHA HFVLDGSGPV
YLEAPSLDLW PKIDWAPDYN KSRRVSLDTL TREEVASWKP GDTLLLNGKM LTGRDAAHKR
IQDMLAKGEP LPVDFTNRVI YYVGPVDPVR DEAVGPAGPT TATRMDKFTD MMLAQTGLIA
MIGKSERGPV AIEAIKKHQS AYLMAVGGAA YLVSKAIKTA KVVGFEDLGM EAIYEFDVVD
MPVTVAVDAG GTSAHITGPA EWQKRIATGE FKSIDVVAA
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