Gene Aave_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1481 
Symbol 
ID4667287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1638972 
End bp1640138 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID639822684 
Producthypothetical protein 
Protein accessionYP_969846 
Protein GI120610168 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC GTGTGCCCGC GCAGGAGGAC TCCGCAATGC CGGAGGCGGG ACCGCGACCG 
GGGCAGGGGC CGGCGCCGGA TGCCGGCCTG GATGCGTCGG GGTTCTGGCA GCGCCTGCGG
CGCGATCCGC ATCCGTTCGA CCTGTTCTTC GCGCTGCGCG TGCTGCAGGC GCGCAGCCGC
GGCCATCCGC GCTTCGGCAA GGCCCTGCGC CCGCGGGACG AGCCGCTGCG CCTGGGCCAG
GACCCGTCGC TGGCCTTCGC GCCCGCGACC CTCGCCGAGG TGCTGCCGGC CACGGCCGGC
CAGCCCGAGC GCCTCACGGT CTGGAACTTC GGCCTCTATG GCCCCAACGG GCCGCTGCCC
ACGCACTTGA CCGAGTACGT GCGCGAGCGG CTGCGGCAGC ACGACGACCC GACGATCGCG
CGCTTCTCCG ACATCTTCCA CCACCGGCTG CTGCTGCTGT TCTTCCGGGC GTGGTCCGAC
ACGCAGCCAG TGACCTCGCT CGACCGTCCG GACAGCGACC TGTTCGGGCG CCACCTGCGC
AGCCTGATCG GCTATGGCGA GGCGTCCCAG CGCGACCGCG ACACCGTACC GGACCATGCC
AAGCAGTACC TGGCGGGCCA CTGGACGCGC TGGACCCGCA ATCCCGAAGG CCTGGTGTCG
GCCCTGCGGA TCTTCTTCGA AGTGCCCGTG GAACTGGTCG AGTTCACGCT GCATTACCTG
GAGCTGGATC CGGAGCAGCA GACCACGCTG TCGCGCGTGC CGCGCAACGC GCGCCTGGGC
GTGGACACGG TGGTGGGCAG CCGGGTGCCC GACGCGCAGG GCAAGTTCCG GCTGCGCATC
GGCCCGCTGC CGCTCGCGCA GTACGAACGC TTCCTGCCGG GCGGCGAAGA CTTCCGGGCG
CTGGTGGACT GGGTGCGCAA CTACGTCGGC ATCGAGTTCG CATGGGATTA CGAGCTGATC
CTGCGCCGCG AGGATGTCCC GCCCTGCCAG CTCGGCGGCA GCGTCCGGCT GGGATGGACG
ACGTGGTCCT TCTCCGGTCC CGCGCAGCGC GATCCGGACG ATTTCCGGCT GGACCCCGAA
CTGTGGCTGG CATCGCGCAG GCGGGCCCGC GCGGATGCCG GTGCGGGATC GCGGGCCGGG
CCCGTCCCGG CGGCCGAAGC GTCCTAG
 
Protein sequence
MSDRVPAQED SAMPEAGPRP GQGPAPDAGL DASGFWQRLR RDPHPFDLFF ALRVLQARSR 
GHPRFGKALR PRDEPLRLGQ DPSLAFAPAT LAEVLPATAG QPERLTVWNF GLYGPNGPLP
THLTEYVRER LRQHDDPTIA RFSDIFHHRL LLLFFRAWSD TQPVTSLDRP DSDLFGRHLR
SLIGYGEASQ RDRDTVPDHA KQYLAGHWTR WTRNPEGLVS ALRIFFEVPV ELVEFTLHYL
ELDPEQQTTL SRVPRNARLG VDTVVGSRVP DAQGKFRLRI GPLPLAQYER FLPGGEDFRA
LVDWVRNYVG IEFAWDYELI LRREDVPPCQ LGGSVRLGWT TWSFSGPAQR DPDDFRLDPE
LWLASRRRAR ADAGAGSRAG PVPAAEAS