| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1472 |
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| Symbol | |
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| ID | 4669879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1626583 |
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| End bp | 1627941 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822675 |
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| Product | hypothetical protein |
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| Protein accession | YP_969837 |
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| Protein GI | 120610159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0650495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC AGAACTCCGT CAACGTTTTC GCCGCCGGCC ATCCGGGCCA GCCCGCCGGG
GCCATGCCCG CGTCCGCACC TCCCGGCGGC ACCGGTGCCG AGCCCGGCAC CAAGCCGTCG
GGCCTGCCCG ATGTCGTGAG CGGCGGCAAT CCGCTCGTGG CCGCGGCCAA TACCCTGCTG
AACCTCATTC CGCAGATCCG CCGCATGGCG ACCAATCCCG ATCCCGCGGC ATTCCAGCAC
TACCTGCTCG AATGCATCCG GCATTTCGAG AGCCGGGCGG GCGGCGCGGG CGTGCCGATG
GAAACCATCA TCGGCGCGCG CTACTGCATC TGCACCGCGA TCGACGAGGC GGCGGCCCAG
ACACCGTGGG GCGGTTCGGG CGTCTGGCCG CAGTACAGCC TGCTCGTGGC GCTGCACAAC
GAAACCTGGG GCGGGGAGAA GTTCTTCCAG CTGCTGTCCA AGCTGGTCCA GACGCCCCAC
CAGCACATCG ACCTCATCGA GCTCATGTAC TTCTGCCTGA TGCTCGGCTT CGAGGGACGC
TATCACGTCA TCGACAACGG GCGCAGCCAG CTCGAGAGCC TGAAGGCCCG GCTGCTGCAG
GTGATCGAGA GCACCCGCGG GGACCGCAGC GGGGCGCTGT CCCTGCACTG GCGCGGCGTG
CAGCGCGCGG CGGTGCCGCC CTGGAGCCTG GTGCCGTTCT GGGTGGCGGC CGCGCTGACC
CTGCTCATCG GCTTCCTGAT CTTCCTCTGG TTCAACTACC GGCTGGCATC GCGCTCGGAC
GAGCTGTTCG CCGCGATCAA TGCCATCCGC CTGCCGAAGA TGCCCTCCGT GGTGGCCGTG
GCGCCACCGA AGCCGCGCCT GCGCCAGTTC CTGGAGCCCG AGATCCGCGA AGGCCTGGTC
GAGGTGAACG ACCAGGCGGA CCGCAGCATC GTGACCCTGC GCGGAGATGG CCTGTTCGAT
CCAGCGTCCA CCGAAGTCAA GCCGCGCTAT GTCGCGGTGA TCCAGCGCAT CGCGTCCGCG
CTCAACGAAG TGTCCGGCAA GGTGGTCGTG AACGGCTATT CCGACAACCA GCCGATCCGC
ACGGCACGCT TCCCTTCGAA CTGGCACCTG TCGCAGGAGC GGGCCCAGGC CGTCGCGGCC
ATGCTGCAGA GGACCATCGC CGACGGGTCC CGCCTGCGGG CCGAAGGCCG TGCCGAAAGC
GACCCGATCG CCCCCAACAG CACGCCGGAA GGCCGGGCGC TGAACCGCCG GGTGGAGATC
GTGCTGATGG TCCCGCCCCA GGCCCGCGAT GCCGAGCTGC AGCTGACTCC CGGCCCGGCT
GCGGCCGGCA CGCCCGCCCC CGGCAATCCG AAGAACTAA
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| Protein sequence | MSMQNSVNVF AAGHPGQPAG AMPASAPPGG TGAEPGTKPS GLPDVVSGGN PLVAAANTLL
NLIPQIRRMA TNPDPAAFQH YLLECIRHFE SRAGGAGVPM ETIIGARYCI CTAIDEAAAQ
TPWGGSGVWP QYSLLVALHN ETWGGEKFFQ LLSKLVQTPH QHIDLIELMY FCLMLGFEGR
YHVIDNGRSQ LESLKARLLQ VIESTRGDRS GALSLHWRGV QRAAVPPWSL VPFWVAAALT
LLIGFLIFLW FNYRLASRSD ELFAAINAIR LPKMPSVVAV APPKPRLRQF LEPEIREGLV
EVNDQADRSI VTLRGDGLFD PASTEVKPRY VAVIQRIASA LNEVSGKVVV NGYSDNQPIR
TARFPSNWHL SQERAQAVAA MLQRTIADGS RLRAEGRAES DPIAPNSTPE GRALNRRVEI
VLMVPPQARD AELQLTPGPA AAGTPAPGNP KN
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