| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1462 |
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| Symbol | |
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| ID | 4665570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1614190 |
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| End bp | 1615446 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822665 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_969827 |
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| Protein GI | 120610149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTT CCGCGCAGCC CCGGACTTCC AGGCGCACCC GCCCCCTCCA GCCCCTCCGT
GGGGCTTTTT CGTGGCAGCC CGTGCTCAGC CGGCAGTGGG CCATGATCGC CTCCGTCGCG
GCGGTCCTGG CACTCGGGGC CTGTTCCCGA AAGGAGCCGC CGCCGGAGCC CGTGCGCTCG
GTCAAGCTGC TCACCGTCGG CACGTCGTCG CTCCACACGC ATGCGGAATA TGCCGGCGAA
GTGCGCGCCC GCATCGAATC GCGCCTGGGC TTCCGCGTGG CGGGCAAGAT CGTCCAGCGG
CAGGCGGAAC TCGGACAGCG CGTGCAGGCC GGCCAGGTGC TGGCGCAGAT CGATCCGCGC
GACTACCAGC TGTCCGCGGA CGCGGCGCGT GCCCAGGTGG CATCGGCGCA GACCCAGCGG
GATCTGGCGG CGGCGGATTA CCAGCGCTTT TCCGCGCTCA AGGCGCAGAA CTTCATCAGC
GGCGCCGAGC TCGACCGGCG CTCGGCCACG CTGAAGGCCG CCGAAGCCTC GCTCGAACAG
GCCCGGGCCC AGGCGGCCTC GCAGAGCAAC CAGACGCAGT ACACGCGGCT CGTGGCCGAT
GCCGCCGGCG TGGTCACCGG CATCGACGCC GAGCCCGGCC AGGTGGTCGC GGCCGGCACG
CCGGTCGTGC GGATCGCCCA GGACGGGCCG CGCGACGTGG TGTTCTCGGT GCCCGAAGAC
CGGCTCGCCC GCGTGCGCCC TGGGCAGGCC GTGACCGTCC GCACTTGGTC GGGAGGCGGC
GCGCTGCCGG GCCGGGTGCG CGAAGTGGCC GCGAGTGCCG ATCCGGTCAC GCGCACCTTC
CTGGCCAAGG TCGCCATCGA ATCCGACACG CCCCCGCCCC TGGGCGCCAC CGCCTACGTG
ACGCCCGACG GGGCCGCGCA GCAAGGGCCG CAGGCCATCA AGCTGCCGAC GAGCGCGCTG
CGCCAGGAAG GCGCGCAGAC CGCCGTCTGG GTCTACGAGC CAGCCAGCGG CACGGTGCGC
TCGCAGGCCG TGCAGATCGC GAGCGCCGAC GGCAACGAGG TGGTGGTGGG CAGCGGCCTT
GCGCCGGGCA TGCAGGTGGT GGCTGCCGGC GTGCACGTGC TCTCTCCGGG GCAGAAGGTG
CTGGTCTACC AGCCGCGCGC GTCCCGTGGC GGCGAGGCTC CGGCCACCAC GCCCGTTTCC
GCACCGGTTC CGGCCGCATC CGGCGCCGCG CCCGCGGCCT CCGCCACCGC ACGCTGA
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| Protein sequence | MPLSAQPRTS RRTRPLQPLR GAFSWQPVLS RQWAMIASVA AVLALGACSR KEPPPEPVRS
VKLLTVGTSS LHTHAEYAGE VRARIESRLG FRVAGKIVQR QAELGQRVQA GQVLAQIDPR
DYQLSADAAR AQVASAQTQR DLAAADYQRF SALKAQNFIS GAELDRRSAT LKAAEASLEQ
ARAQAASQSN QTQYTRLVAD AAGVVTGIDA EPGQVVAAGT PVVRIAQDGP RDVVFSVPED
RLARVRPGQA VTVRTWSGGG ALPGRVREVA ASADPVTRTF LAKVAIESDT PPPLGATAYV
TPDGAAQQGP QAIKLPTSAL RQEGAQTAVW VYEPASGTVR SQAVQIASAD GNEVVVGSGL
APGMQVVAAG VHVLSPGQKV LVYQPRASRG GEAPATTPVS APVPAASGAA PAASATAR
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