Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1458 |
Symbol | clpX |
ID | 4666614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1607287 |
End bp | 1608552 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639822660 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_969823 |
Protein GI | 120610145 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA AAAAAGGCTC TTCCAGCGAA AAAACCCTTT ACTGCTCCTT CTGCGGCAAG AGCCAGCACG AGGTGAAGAA ACTCATCGCT GGCCCGTCGG TTTTCATTTG CGACGAGTGC ATCGACCTGT GCAATGAGAT CATCCGCGAC GAGCTGCCTT CAACCGAAGG TGCGCGGGAT TCGCGCGGCG ACCTGCCGAC CCCGTCGGAG ATCAAGGCCA ACCTCGACAA CTACGTGATC GGCCAGGAAA TCGCCAAGCG CACCCTGGCC GTGGCCGTGT ACAACCACTA CAAGCGCCTG CGCCACAAGG ACAAGGCCGG CAAGGACGAG GTCGAGCTCG CGAAAAGCAA CATCCTGCTG ATCGGCCCCA CCGGCTCGGG CAAGACCCTG CTGGCCCAGA CCCTCGCGCG CATGCTCGAC GTGCCCTTCG TGATGGCCGA CGCCACCACC CTCACCGAGG CCGGCTACGT CGGCGAGGAC GTCGAGAACA TCGTCCAGAA GCTGCTGCAG AGCTGCAACT ACGAGGTGGA ACGGGCCCAG CGCGGCATCG TCTACATCGA CGAGATCGAC AAGATCTCCC GCAAGTCCGA CAACCCTTCC ATCACGCGCG ATGTCTCCGG CGAAGGCGTG CAGCAGGCGC TGCTCAAGCT GATCGAGGGC ACCATGGCCA GCGTCCCCCC CCAGGGCGGC CGCAAGCATC CCAACCAGGA TTTCCTGCAG ATCGACACGA CCAACATCCT GTTCATCTGC GGCGGCGCCT TCGCCGGCCT GGAAAAGGTC ATCGAGAACC GCACGGAGGC CTCGGGCATC GGCTTCGGCG CCGCCGTCAA GAGCAAGAAG CAGCGCTCGC TCACCGAGGT GTTCACCGAG ATCGAGCCTG AAGACCTCAT CAAGTTCGGC CTCATCCCCG AACTGGTCGG CCGCATGCCC GTGGTCACGG CGCTGGCGGA ACTCAGCGAG GACGCCCTGG TGCAGATCCT CACGGAGCCC AAGAACGCCC TGGTCAAGCA GTACAGCAAG CTGCTGGCCA TGGAGGGCGT GGAGCTGGAG ATCCGCCCCG CCGCCCTCAA GGCCATCGCC CGCAAGGCCC TGGCCCGCAA GACCGGCGCC CGCGGCCTGC GCTCCATCCT CGAGCAGTCC CTGATCGGTA CCATGTTCGA TCTTCCCAAT ACCAGCAACG TGGAGAAGGT CGTGGTGGAC GAATCCACCA TCGAAGAGAA CAAGGCCCCG TTGCTCGTCT ACCGGGAAGC GGCCAAGAAG GCCTGA
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Protein sequence | MAEKKGSSSE KTLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD ELPSTEGARD SRGDLPTPSE IKANLDNYVI GQEIAKRTLA VAVYNHYKRL RHKDKAGKDE VELAKSNILL IGPTGSGKTL LAQTLARMLD VPFVMADATT LTEAGYVGED VENIVQKLLQ SCNYEVERAQ RGIVYIDEID KISRKSDNPS ITRDVSGEGV QQALLKLIEG TMASVPPQGG RKHPNQDFLQ IDTTNILFIC GGAFAGLEKV IENRTEASGI GFGAAVKSKK QRSLTEVFTE IEPEDLIKFG LIPELVGRMP VVTALAELSE DALVQILTEP KNALVKQYSK LLAMEGVELE IRPAALKAIA RKALARKTGA RGLRSILEQS LIGTMFDLPN TSNVEKVVVD ESTIEENKAP LLVYREAAKK A
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